Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AL355488.2-201ENST00000609909 2850 ntBASIC5.73□□□□□ -1.49
SCN2BO60939 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SCN2BO60939 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCN2BO60939 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SCN2BO60939 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.72□□□□□ -1.49
SCN2BO60939 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCN2BO60939 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCN2BO60939 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCN2BO60939 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCN2BO60939 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.72□□□□□ -1.49
SCN2BO60939 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.72□□□□□ -1.49
SCN2BO60939 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SCN2BO60939 LINC01613-201ENST00000561476 2780 ntBASIC5.72□□□□□ -1.49
SCN2BO60939 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SCN2BO60939 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCN2BO60939 SNORA64.3-201ENST00000365647 134 ntBASIC5.72□□□□□ -1.49
SCN2BO60939 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.72□□□□□ -1.49
SCN2BO60939 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.72□□□□□ -1.49
SCN2BO60939 MIR551B-201ENST00000384984 96 ntBASIC5.72□□□□□ -1.49
SCN2BO60939 AL133260.1-201ENST00000405720 405 ntBASIC5.72□□□□□ -1.49
SCN2BO60939 AL139805.1-201ENST00000407837 289 ntBASIC5.72□□□□□ -1.49
SCN2BO60939 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.72□□□□□ -1.49
SCN2BO60939 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.72□□□□□ -1.49
SCN2BO60939 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.72□□□□□ -1.49
SCN2BO60939 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.72□□□□□ -1.49
SCN2BO60939 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
SCN2BO60939 KRT8P51-201ENST00000438938 274 ntBASIC5.72□□□□□ -1.49
SCN2BO60939 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SCN2BO60939 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.72□□□□□ -1.49
SCN2BO60939 AC124945.1-201ENST00000485133 188 ntBASIC5.72□□□□□ -1.49
SCN2BO60939 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.72□□□□□ -1.49
SCN2BO60939 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC5.72□□□□□ -1.49
SCN2BO60939 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.72□□□□□ -1.49
SCN2BO60939 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.72□□□□□ -1.49
SCN2BO60939 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.72□□□□□ -1.49
SCN2BO60939 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.72□□□□□ -1.49
SCN2BO60939 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.72□□□□□ -1.49
SCN2BO60939 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.72□□□□□ -1.49
SCN2BO60939 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.72□□□□□ -1.49
SCN2BO60939 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.72□□□□□ -1.49
SCN2BO60939 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.72□□□□□ -1.49
SCN2BO60939 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.72□□□□□ -1.49
SCN2BO60939 AC096861.1-201ENST00000616652 240 ntBASIC5.72□□□□□ -1.49
SCN2BO60939 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.72□□□□□ -1.49
SCN2BO60939 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
SCN2BO60939 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SCN2BO60939 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCN2BO60939 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
SCN2BO60939 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.72□□□□□ -1.49
SCN2BO60939 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SCN2BO60939 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SCN2BO60939 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.72□□□□□ -1.49
SCN2BO60939 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SCN2BO60939 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SCN2BO60939 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SCN2BO60939 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SCN2BO60939 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SCN2BO60939 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SCN2BO60939 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SCN2BO60939 AC116158.1-201ENST00000560231 2129 ntBASIC5.71□□□□□ -1.5
SCN2BO60939 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SCN2BO60939 AC130304.1-201ENST00000622942 2385 ntBASIC5.71□□□□□ -1.5
SCN2BO60939 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SCN2BO60939 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
SCN2BO60939 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
SCN2BO60939 WDR95P-201ENST00000425638 1542 ntBASIC5.71□□□□□ -1.5
SCN2BO60939 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
SCN2BO60939 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.71□□□□□ -1.5
SCN2BO60939 RN7SKP184-201ENST00000362348 333 ntBASIC5.71□□□□□ -1.5
SCN2BO60939 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.71□□□□□ -1.5
SCN2BO60939 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SCN2BO60939 PRELID1P1-201ENST00000403549 660 ntBASIC5.71□□□□□ -1.5
SCN2BO60939 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SCN2BO60939 RN7SKP108-201ENST00000411367 328 ntBASIC5.71□□□□□ -1.5
SCN2BO60939 MYL6P5-201ENST00000412707 459 ntBASIC5.71□□□□□ -1.5
SCN2BO60939 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.71□□□□□ -1.5
SCN2BO60939 AL096829.1-201ENST00000413677 457 ntBASIC5.71□□□□□ -1.5
SCN2BO60939 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.71□□□□□ -1.5
SCN2BO60939 AL590399.2-201ENST00000427536 309 ntBASIC5.71□□□□□ -1.5
SCN2BO60939 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.71□□□□□ -1.5
SCN2BO60939 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SCN2BO60939 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.71□□□□□ -1.5
SCN2BO60939 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.71□□□□□ -1.5
SCN2BO60939 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SCN2BO60939 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.71□□□□□ -1.5
SCN2BO60939 snoU109.5-201ENST00000516231 132 ntBASIC5.71□□□□□ -1.5
SCN2BO60939 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.71□□□□□ -1.5
SCN2BO60939 OR7E158P-201ENST00000524483 910 ntBASIC5.71□□□□□ -1.5
SCN2BO60939 AC021269.1-201ENST00000526860 705 ntBASIC5.71□□□□□ -1.5
SCN2BO60939 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.71□□□□□ -1.5
SCN2BO60939 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.71□□□□□ -1.5
SCN2BO60939 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SCN2BO60939 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.71□□□□□ -1.5
SCN2BO60939 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.71□□□□□ -1.5
SCN2BO60939 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.71□□□□□ -1.5
SCN2BO60939 AC012368.3-201ENST00000604190 219 ntBASIC5.71□□□□□ -1.5
SCN2BO60939 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.71□□□□□ -1.5
SCN2BO60939 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SCN2BO60939 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SCN2BO60939 MAPK10-350ENST00000641777 965 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms