Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 AC025459.1-201ENST00000504072 156 ntBASIC5.78□□□□□ -1.48
HOXA3O43365 HPRT1P2-201ENST00000505250 544 ntBASIC5.78□□□□□ -1.48
HOXA3O43365 MRPL57P6-201ENST00000506570 309 ntBASIC5.78□□□□□ -1.48
HOXA3O43365 NDUFB4P12-201ENST00000513465 390 ntBASIC5.78□□□□□ -1.48
HOXA3O43365 FABP5P12-201ENST00000515543 389 ntBASIC5.78□□□□□ -1.48
HOXA3O43365 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXA3O43365 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.78□□□□□ -1.48
HOXA3O43365 IGHVIII-26-1-201ENST00000520387 250 ntBASIC5.78□□□□□ -1.48
HOXA3O43365 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXA3O43365 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC5.78□□□□□ -1.48
HOXA3O43365 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXA3O43365 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXA3O43365 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.78□□□□□ -1.48
HOXA3O43365 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXA3O43365 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXA3O43365 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXA3O43365 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HOXA3O43365 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HOXA3O43365 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXA3O43365 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXA3O43365 AC010287.1-201ENST00000566916 357 ntBASIC5.78□□□□□ -1.48
HOXA3O43365 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXA3O43365 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXA3O43365 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXA3O43365 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXA3O43365 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.78□□□□□ -1.48
HOXA3O43365 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXA3O43365 SGO1P1-201ENST00000603525 1447 ntBASIC5.78□□□□□ -1.48
HOXA3O43365 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.78□□□□□ -1.48
HOXA3O43365 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.78□□□□□ -1.48
HOXA3O43365 AC068733.2-201ENST00000605434 1418 ntBASIC5.78□□□□□ -1.48
HOXA3O43365 AL031601.1-201ENST00000605702 394 ntBASIC5.78□□□□□ -1.48
HOXA3O43365 AC013468.1-201ENST00000608680 598 ntBASIC5.78□□□□□ -1.48
HOXA3O43365 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXA3O43365 AL162574.1-201ENST00000615702 950 ntBASIC5.78□□□□□ -1.48
HOXA3O43365 HTR1DP1-201ENST00000616500 888 ntBASIC5.78□□□□□ -1.48
HOXA3O43365 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXA3O43365 AL158062.1-201ENST00000619632 745 ntBASIC5.78□□□□□ -1.48
HOXA3O43365 AC025287.2-201ENST00000621911 668 ntBASIC5.78□□□□□ -1.48
HOXA3O43365 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HOXA3O43365 LRRC2-AS1-201ENST00000599511 2291 ntBASIC5.78□□□□□ -1.48
HOXA3O43365 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXA3O43365 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXA3O43365 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXA3O43365 AC138627.1-203ENST00000641872 1680 ntBASIC5.78□□□□□ -1.48
HOXA3O43365 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HOXA3O43365 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXA3O43365 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.78□□□□□ -1.48
HOXA3O43365 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXA3O43365 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXA3O43365 RDH11-203ENST00000553384 1926 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HOXA3O43365 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXA3O43365 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXA3O43365 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
HOXA3O43365 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC5.77□□□□□ -1.48
HOXA3O43365 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.48
HOXA3O43365 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.48
HOXA3O43365 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
HOXA3O43365 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXA3O43365 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXA3O43365 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXA3O43365 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
HOXA3O43365 LINC00208-201ENST00000304233 2150 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXA3O43365 HCG18-244ENST00000602516 2890 ntBASIC5.77□□□□□ -1.49
HOXA3O43365 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXA3O43365 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXA3O43365 AL512310.3-201ENST00000547023 1335 ntBASIC5.77□□□□□ -1.49
HOXA3O43365 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXA3O43365 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXA3O43365 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC5.77□□□□□ -1.49
HOXA3O43365 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXA3O43365 GPM6A-202ENST00000393658 2821 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXA3O43365 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXA3O43365 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXA3O43365 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXA3O43365 MTCO1P18-201ENST00000455518 1419 ntBASIC5.77□□□□□ -1.49
HOXA3O43365 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXA3O43365 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXA3O43365 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HOXA3O43365 OR10D1P-201ENST00000355343 936 ntBASIC5.77□□□□□ -1.49
HOXA3O43365 RN7SKP174-201ENST00000363803 330 ntBASIC5.77□□□□□ -1.49
HOXA3O43365 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXA3O43365 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXA3O43365 RNU6-192P-201ENST00000391253 100 ntBASIC5.77□□□□□ -1.49
HOXA3O43365 DNAJC19P6-201ENST00000401853 280 ntBASIC5.77□□□□□ -1.49
HOXA3O43365 GSTA8P-201ENST00000404253 637 ntBASIC5.77□□□□□ -1.49
HOXA3O43365 AL451046.1-201ENST00000406097 534 ntBASIC5.77□□□□□ -1.49
HOXA3O43365 IGKV1OR2-3-201ENST00000411475 288 ntBASIC5.77□□□□□ -1.49
HOXA3O43365 AC010385.1-201ENST00000412374 256 ntBASIC5.77□□□□□ -1.49
HOXA3O43365 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXA3O43365 VDAC1P10-201ENST00000416715 891 ntBASIC5.77□□□□□ -1.49
HOXA3O43365 AC009500.1-201ENST00000420684 583 ntBASIC5.77□□□□□ -1.49
HOXA3O43365 HCG25-217ENST00000422366 702 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXA3O43365 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXA3O43365 AL589794.1-201ENST00000424971 390 ntBASIC5.77□□□□□ -1.49
HOXA3O43365 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXA3O43365 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXA3O43365 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXA3O43365 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXA3O43365 ISCA1P2-201ENST00000438679 421 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms