Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MRPS21P8-201ENST00000569196 235 ntBASIC5.68□□□□□ -1.5
UPK1AO00322 AC060780.2-201ENST00000589047 198 ntBASIC5.68□□□□□ -1.5
UPK1AO00322 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UPK1AO00322 SMIM12P1-201ENST00000603004 274 ntBASIC5.68□□□□□ -1.5
UPK1AO00322 AC005828.7-201ENST00000607331 556 ntBASIC5.68□□□□□ -1.5
UPK1AO00322 RFPL4AP6-201ENST00000616792 846 ntBASIC5.68□□□□□ -1.5
UPK1AO00322 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
UPK1AO00322 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.68□□□□□ -1.5
UPK1AO00322 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
UPK1AO00322 AC004076.2-201ENST00000620532 3323 ntBASIC5.68□□□□□ -1.5
UPK1AO00322 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.68□□□□□ -1.5
UPK1AO00322 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.68□□□□□ -1.5
UPK1AO00322 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.68□□□□□ -1.5
UPK1AO00322 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UPK1AO00322 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
UPK1AO00322 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
UPK1AO00322 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
UPK1AO00322 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
UPK1AO00322 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.67□□□□□ -1.5
UPK1AO00322 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.67□□□□□ -1.5
UPK1AO00322 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.67□□□□□ -1.5
UPK1AO00322 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
UPK1AO00322 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
UPK1AO00322 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.67□□□□□ -1.5
UPK1AO00322 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.67□□□□□ -1.5
UPK1AO00322 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
UPK1AO00322 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.67□□□□□ -1.5
UPK1AO00322 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.67□□□□□ -1.5
UPK1AO00322 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
UPK1AO00322 AL359885.1-201ENST00000415786 903 ntBASIC5.67□□□□□ -1.5
UPK1AO00322 RPL35AP31-201ENST00000418340 337 ntBASIC5.67□□□□□ -1.5
UPK1AO00322 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.67□□□□□ -1.5
UPK1AO00322 AL139158.1-201ENST00000424719 340 ntBASIC5.67□□□□□ -1.5
UPK1AO00322 AC130360.1-201ENST00000425489 1117 ntBASIC5.67□□□□□ -1.5
UPK1AO00322 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.67□□□□□ -1.5
UPK1AO00322 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.67□□□□□ -1.5
UPK1AO00322 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.67□□□□□ -1.5
UPK1AO00322 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.67□□□□□ -1.5
UPK1AO00322 SEPT14P12-201ENST00000442280 560 ntBASIC5.67□□□□□ -1.5
UPK1AO00322 RPSAP40-201ENST00000442343 891 ntBASIC5.67□□□□□ -1.5
UPK1AO00322 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.67□□□□□ -1.5
UPK1AO00322 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC5.67□□□□□ -1.5
UPK1AO00322 ZNF619P1-201ENST00000446539 752 ntBASIC5.67□□□□□ -1.5
UPK1AO00322 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.67□□□□□ -1.5
UPK1AO00322 AC002553.3-201ENST00000453002 341 ntBASIC5.67□□□□□ -1.5
UPK1AO00322 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
UPK1AO00322 RPL23AP40-201ENST00000487630 390 ntBASIC5.67□□□□□ -1.5
UPK1AO00322 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.67□□□□□ -1.5
UPK1AO00322 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.67□□□□□ -1.5
UPK1AO00322 CR383658.1-201ENST00000514609 734 ntBASIC5.67□□□□□ -1.5
UPK1AO00322 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.67□□□□□ -1.5
UPK1AO00322 AC130365.2-201ENST00000525882 1201 ntBASIC5.67□□□□□ -1.5
UPK1AO00322 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.67□□□□□ -1.5
UPK1AO00322 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.67□□□□□ -1.5
UPK1AO00322 AC126615.2-201ENST00000553003 515 ntBASIC5.67□□□□□ -1.5
UPK1AO00322 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
UPK1AO00322 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
UPK1AO00322 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.67□□□□□ -1.5
UPK1AO00322 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.67□□□□□ -1.5
UPK1AO00322 AC119403.2-201ENST00000590960 598 ntBASIC5.67□□□□□ -1.5
UPK1AO00322 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.67□□□□□ -1.5
UPK1AO00322 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.67□□□□□ -1.5
UPK1AO00322 AL136097.3-201ENST00000611097 505 ntBASIC5.67□□□□□ -1.5
UPK1AO00322 uc_338.31-201ENST00000615595 186 ntBASIC5.67□□□□□ -1.5
UPK1AO00322 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.67□□□□□ -1.5
UPK1AO00322 AC073488.6-201ENST00000632293 754 ntBASIC5.67□□□□□ -1.5
UPK1AO00322 AL357140.4-201ENST00000636827 412 ntBASIC5.67□□□□□ -1.5
UPK1AO00322 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
UPK1AO00322 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
UPK1AO00322 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
UPK1AO00322 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.67□□□□□ -1.5
UPK1AO00322 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
UPK1AO00322 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
UPK1AO00322 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.67□□□□□ -1.5
UPK1AO00322 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
UPK1AO00322 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
UPK1AO00322 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
UPK1AO00322 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
UPK1AO00322 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.67□□□□□ -1.5
UPK1AO00322 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.67□□□□□ -1.5
UPK1AO00322 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
UPK1AO00322 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
UPK1AO00322 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
UPK1AO00322 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
UPK1AO00322 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
UPK1AO00322 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
UPK1AO00322 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
UPK1AO00322 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
UPK1AO00322 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
UPK1AO00322 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
UPK1AO00322 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
UPK1AO00322 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
UPK1AO00322 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.66□□□□□ -1.5
UPK1AO00322 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
UPK1AO00322 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.66□□□□□ -1.5
UPK1AO00322 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
UPK1AO00322 RN7SKP86-201ENST00000410454 332 ntBASIC5.66□□□□□ -1.5
UPK1AO00322 RN7SKP166-201ENST00000410812 305 ntBASIC5.66□□□□□ -1.5
UPK1AO00322 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.66□□□□□ -1.5
UPK1AO00322 RPS7P8-201ENST00000418311 581 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 212.7 ms