Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.89□□□□□ -1.47
PDLIM1O00151 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PDLIM1O00151 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PDLIM1O00151 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.89□□□□□ -1.47
PDLIM1O00151 MIR551B-201ENST00000384984 96 ntBASIC5.89□□□□□ -1.47
PDLIM1O00151 RN7SKP205-201ENST00000410999 307 ntBASIC5.89□□□□□ -1.47
PDLIM1O00151 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PDLIM1O00151 AC064862.5-201ENST00000440618 334 ntBASIC5.89□□□□□ -1.47
PDLIM1O00151 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.89□□□□□ -1.47
PDLIM1O00151 USP9YP2-201ENST00000504503 1000 ntBASIC5.89□□□□□ -1.47
PDLIM1O00151 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.89□□□□□ -1.47
PDLIM1O00151 USP9YP1-201ENST00000513521 1002 ntBASIC5.89□□□□□ -1.47
PDLIM1O00151 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.89□□□□□ -1.47
PDLIM1O00151 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDLIM1O00151 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDLIM1O00151 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.89□□□□□ -1.47
PDLIM1O00151 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.89□□□□□ -1.47
PDLIM1O00151 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC5.89□□□□□ -1.47
PDLIM1O00151 AC005519.1-201ENST00000554490 601 ntBASIC5.89□□□□□ -1.47
PDLIM1O00151 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.89□□□□□ -1.47
PDLIM1O00151 AC009120.3-201ENST00000563335 499 ntBASIC5.89□□□□□ -1.47
PDLIM1O00151 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.89□□□□□ -1.47
PDLIM1O00151 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.89□□□□□ -1.47
PDLIM1O00151 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.89□□□□□ -1.47
PDLIM1O00151 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.89□□□□□ -1.47
PDLIM1O00151 AC245052.7-201ENST00000601161 359 ntBASIC5.89□□□□□ -1.47
PDLIM1O00151 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.89□□□□□ -1.47
PDLIM1O00151 AC036176.3-201ENST00000602456 418 ntBASIC5.89□□□□□ -1.47
PDLIM1O00151 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.89□□□□□ -1.47
PDLIM1O00151 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.89□□□□□ -1.47
PDLIM1O00151 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PDLIM1O00151 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDLIM1O00151 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDLIM1O00151 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
PDLIM1O00151 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.89□□□□□ -1.47
PDLIM1O00151 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PDLIM1O00151 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDLIM1O00151 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.89□□□□□ -1.47
PDLIM1O00151 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PDLIM1O00151 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PDLIM1O00151 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.89□□□□□ -1.47
PDLIM1O00151 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
PDLIM1O00151 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PDLIM1O00151 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PDLIM1O00151 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDLIM1O00151 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PDLIM1O00151 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
PDLIM1O00151 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.88□□□□□ -1.47
PDLIM1O00151 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.88□□□□□ -1.47
PDLIM1O00151 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM1O00151 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.88□□□□□ -1.47
PDLIM1O00151 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM1O00151 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.88□□□□□ -1.47
PDLIM1O00151 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.88□□□□□ -1.47
PDLIM1O00151 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
PDLIM1O00151 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.88□□□□□ -1.47
PDLIM1O00151 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
PDLIM1O00151 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM1O00151 RNA5SP308-201ENST00000362532 115 ntBASIC5.88□□□□□ -1.47
PDLIM1O00151 RNA5SP140-201ENST00000364524 92 ntBASIC5.88□□□□□ -1.47
PDLIM1O00151 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
PDLIM1O00151 RPL12P23-201ENST00000405880 490 ntBASIC5.88□□□□□ -1.47
PDLIM1O00151 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
PDLIM1O00151 SETP15-201ENST00000412724 337 ntBASIC5.88□□□□□ -1.47
PDLIM1O00151 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM1O00151 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM1O00151 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.88□□□□□ -1.47
PDLIM1O00151 PA2G4P1-201ENST00000442248 1197 ntBASIC5.88□□□□□ -1.47
PDLIM1O00151 RBMY2AP-201ENST00000445405 1157 ntBASIC5.88□□□□□ -1.47
PDLIM1O00151 UBBP5-201ENST00000446970 266 ntBASIC5.88□□□□□ -1.47
PDLIM1O00151 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.88□□□□□ -1.47
PDLIM1O00151 RBMY2CP-201ENST00000448575 1157 ntBASIC5.88□□□□□ -1.47
PDLIM1O00151 RBMY2DP-202ENST00000448881 1157 ntBASIC5.88□□□□□ -1.47
PDLIM1O00151 AKR1D1P1-201ENST00000457236 936 ntBASIC5.88□□□□□ -1.47
PDLIM1O00151 RPL5P22-201ENST00000480199 884 ntBASIC5.88□□□□□ -1.47
PDLIM1O00151 RN7SL37P-201ENST00000490461 307 ntBASIC5.88□□□□□ -1.47
PDLIM1O00151 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.88□□□□□ -1.47
PDLIM1O00151 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.88□□□□□ -1.47
PDLIM1O00151 OR8A2P-201ENST00000528631 952 ntBASIC5.88□□□□□ -1.47
PDLIM1O00151 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.88□□□□□ -1.47
PDLIM1O00151 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.88□□□□□ -1.47
PDLIM1O00151 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
PDLIM1O00151 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.88□□□□□ -1.47
PDLIM1O00151 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC5.88□□□□□ -1.47
PDLIM1O00151 ADAM3B-201ENST00000569937 840 ntBASIC5.88□□□□□ -1.47
PDLIM1O00151 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.88□□□□□ -1.47
PDLIM1O00151 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.88□□□□□ -1.47
PDLIM1O00151 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.88□□□□□ -1.47
PDLIM1O00151 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.88□□□□□ -1.47
PDLIM1O00151 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM1O00151 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
PDLIM1O00151 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.88□□□□□ -1.47
PDLIM1O00151 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.88□□□□□ -1.47
PDLIM1O00151 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM1O00151 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.88□□□□□ -1.47
PDLIM1O00151 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM1O00151 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.88□□□□□ -1.47
PDLIM1O00151 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM1O00151 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PDLIM1O00151 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms