Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 AC015689.2-201ENST00000528172 1738 ntBASIC6.36□□□□□ -1.39
YIPF1Q9Y548 ZNF812P-201ENST00000457674 1694 ntBASIC6.36□□□□□ -1.39
YIPF1Q9Y548 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 CDY5P-201ENST00000411487 1580 ntBASIC6.36□□□□□ -1.39
YIPF1Q9Y548 CDY9P-201ENST00000451397 1580 ntBASIC6.36□□□□□ -1.39
YIPF1Q9Y548 AC110373.1-201ENST00000505994 3505 ntBASIC6.36□□□□□ -1.39
YIPF1Q9Y548 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 AC104162.1-201ENST00000430831 2382 ntBASIC6.36□□□□□ -1.39
YIPF1Q9Y548 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 RN7SKP77-201ENST00000363261 353 ntBASIC6.36□□□□□ -1.39
YIPF1Q9Y548 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 SNRPEP6-201ENST00000407465 277 ntBASIC6.36□□□□□ -1.39
YIPF1Q9Y548 MTATP6P19-201ENST00000413797 659 ntBASIC6.36□□□□□ -1.39
YIPF1Q9Y548 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 AL512637.1-201ENST00000439523 1231 ntBASIC6.36□□□□□ -1.39
YIPF1Q9Y548 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 AC011411.1-201ENST00000509592 876 ntBASIC6.36□□□□□ -1.39
YIPF1Q9Y548 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 KCTD9P4-201ENST00000526766 1166 ntBASIC6.36□□□□□ -1.39
YIPF1Q9Y548 OR6M2P-201ENST00000529831 871 ntBASIC6.36□□□□□ -1.39
YIPF1Q9Y548 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 AC020916.2-201ENST00000591242 360 ntBASIC6.36□□□□□ -1.39
YIPF1Q9Y548 AC024589.2-201ENST00000605642 1294 ntBASIC6.36□□□□□ -1.39
YIPF1Q9Y548 AL021368.3-201ENST00000607119 578 ntBASIC6.36□□□□□ -1.39
YIPF1Q9Y548 AL021918.2-201ENST00000613415 194 ntBASIC6.36□□□□□ -1.39
YIPF1Q9Y548 TCL6_3.1-201ENST00000619064 137 ntBASIC6.36□□□□□ -1.39
YIPF1Q9Y548 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 AC062029.1-202ENST00000606164 3651 ntBASIC6.36□□□□□ -1.39
YIPF1Q9Y548 AL033543.1-201ENST00000623440 13454 ntBASIC6.36□□□□□ -1.39
YIPF1Q9Y548 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
YIPF1Q9Y548 RNF19BPY-201ENST00000458209 1550 ntBASIC6.35□□□□□ -1.39
YIPF1Q9Y548 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.35□□□□□ -1.39
YIPF1Q9Y548 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
YIPF1Q9Y548 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
YIPF1Q9Y548 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
YIPF1Q9Y548 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
YIPF1Q9Y548 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
YIPF1Q9Y548 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
YIPF1Q9Y548 AC096921.2-201ENST00000561507 1916 ntBASIC6.35□□□□□ -1.39
YIPF1Q9Y548 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.35□□□□□ -1.39
YIPF1Q9Y548 AC119674.1-213ENST00000641177 1386 ntBASIC6.35□□□□□ -1.39
YIPF1Q9Y548 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
YIPF1Q9Y548 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
YIPF1Q9Y548 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
YIPF1Q9Y548 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
YIPF1Q9Y548 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
YIPF1Q9Y548 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.35□□□□□ -1.39
YIPF1Q9Y548 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
YIPF1Q9Y548 OR10R3P-201ENST00000361688 942 ntBASIC6.35□□□□□ -1.39
YIPF1Q9Y548 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
YIPF1Q9Y548 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
YIPF1Q9Y548 RNA5SP178-201ENST00000410380 128 ntBASIC6.35□□□□□ -1.39
YIPF1Q9Y548 AC245060.4-201ENST00000413293 1121 ntBASIC6.35□□□□□ -1.39
YIPF1Q9Y548 EEF1B2P8-201ENST00000414101 671 ntBASIC6.35□□□□□ -1.39
YIPF1Q9Y548 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.35□□□□□ -1.39
YIPF1Q9Y548 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.35□□□□□ -1.39
YIPF1Q9Y548 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.35□□□□□ -1.39
YIPF1Q9Y548 TUBB4BP6-201ENST00000437576 479 ntBASIC6.35□□□□□ -1.39
YIPF1Q9Y548 BMS1P10-201ENST00000443754 1120 ntBASIC6.35□□□□□ -1.39
YIPF1Q9Y548 OR13K1P-201ENST00000444577 975 ntBASIC6.35□□□□□ -1.39
YIPF1Q9Y548 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
YIPF1Q9Y548 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.35□□□□□ -1.39
YIPF1Q9Y548 VN1R96P-201ENST00000446052 858 ntBASIC6.35□□□□□ -1.39
YIPF1Q9Y548 AL157385.1-201ENST00000446973 268 ntBASIC6.35□□□□□ -1.39
YIPF1Q9Y548 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
YIPF1Q9Y548 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.35□□□□□ -1.39
YIPF1Q9Y548 AC103563.5-201ENST00000455643 364 ntBASIC6.35□□□□□ -1.39
YIPF1Q9Y548 RNU6-775P-201ENST00000459318 96 ntBASIC6.35□□□□□ -1.39
YIPF1Q9Y548 AC023245.1-201ENST00000468501 517 ntBASIC6.35□□□□□ -1.39
YIPF1Q9Y548 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.35□□□□□ -1.39
YIPF1Q9Y548 RN7SL273P-201ENST00000481561 299 ntBASIC6.35□□□□□ -1.39
YIPF1Q9Y548 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.35□□□□□ -1.39
YIPF1Q9Y548 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC6.35□□□□□ -1.39
YIPF1Q9Y548 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms