Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 OSTCP4-201ENST00000424397 449 ntBASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 RPS7P14-201ENST00000426405 583 ntBASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 AC234771.2-201ENST00000445718 597 ntBASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 AC104849.1-201ENST00000462623 405 ntBASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 RN7SL326P-201ENST00000477493 296 ntBASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 RPL12P31-201ENST00000478433 450 ntBASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 AC026782.2-201ENST00000510845 636 ntBASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 AC093816.1-201ENST00000515076 913 ntBASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 RNA5SP206-201ENST00000516703 121 ntBASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 CYCSP25-201ENST00000525280 316 ntBASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 MIR3157-201ENST00000578688 85 ntBASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 AC063977.7-201ENST00000594454 337 ntBASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 AC005899.6-201ENST00000620729 297 ntBASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 CCNT2P1-201ENST00000423082 1315 ntBASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 AC005261.6-201ENST00000623072 1387 ntBASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 AC011416.1-201ENST00000514947 1732 ntBASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
RHBDD3Q9Y3P4 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 RNA5SP77-201ENST00000365394 120 ntBASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 AC013268.2-201ENST00000420753 337 ntBASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 AC112492.2-201ENST00000432774 1030 ntBASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 SOCS5P1-201ENST00000440415 949 ntBASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 AC016908.1-201ENST00000442571 1219 ntBASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 AC245291.3-201ENST00000443400 292 ntBASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 AC073594.1-201ENST00000462065 364 ntBASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 IGKV2-19-201ENST00000518132 283 ntBASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 AC092865.1-201ENST00000544395 1023 ntBASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 AC020916.2-201ENST00000591242 360 ntBASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 AC012368.3-201ENST00000604190 219 ntBASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 SNORA74.4-201ENST00000607595 199 ntBASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 AL031658.2-201ENST00000616850 651 ntBASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 AL138693.1-201ENST00000622219 129 ntBASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 CASC19-255ENST00000641733 1385 ntBASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 CASC19-246ENST00000641625 1606 ntBASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 AC015689.2-201ENST00000528172 1738 ntBASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RHBDD3Q9Y3P4 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RHBDD3Q9Y3P4 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms