Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 AC121758.1-202ENST00000556917 658 ntBASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 SETP3-201ENST00000581726 813 ntBASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 AC027334.1-201ENST00000603257 310 ntBASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 AL121768.1-201ENST00000613917 2544 ntBASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.61□□□□□ -1.51
TRAPPC4Q9Y296 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 RNA5SP346-201ENST00000363541 121 ntBASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 RN7SKP144-201ENST00000411108 279 ntBASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 HIGD1AP16-201ENST00000450986 258 ntBASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 OR7E22P-201ENST00000478335 1035 ntBASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 AC017007.3-201ENST00000479865 435 ntBASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 NPM1P28-201ENST00000492269 840 ntBASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 RN7SL362P-201ENST00000494228 267 ntBASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 AC090958.1-201ENST00000511122 351 ntBASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 AC036111.2-201ENST00000533247 901 ntBASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 AC022325.1-201ENST00000502748 2199 ntBASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 ADAM24P-201ENST00000398655 2101 ntBASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 AC096921.2-201ENST00000561507 1916 ntBASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRAPPC4Q9Y296 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 AC138907.8-201ENST00000623981 2256 ntBASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 AC027279.4-201ENST00000624371 2072 ntBASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 AC079753.1-201ENST00000623243 3868 ntBASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 MIR188-201ENST00000385034 86 ntBASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 AL359885.1-201ENST00000415786 903 ntBASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 AL158827.1-201ENST00000416300 391 ntBASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 AC073410.1-201ENST00000435125 589 ntBASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 AL133351.3-201ENST00000454998 193 ntBASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 AC005017.1-201ENST00000482002 490 ntBASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 RPL29P23-201ENST00000486188 442 ntBASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 SNX18P24-201ENST00000505249 671 ntBASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 SNX18P25-201ENST00000510539 758 ntBASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 AC108103.1-201ENST00000511286 446 ntBASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 AC138207.8-204ENST00000579588 527 ntBASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 AC027229.1-201ENST00000583887 253 ntBASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 AP001823.1-201ENST00000604056 1003 ntBASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.59□□□□□ -1.51
TRAPPC4Q9Y296 AC063952.1-203ENST00000634410 658 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms