Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AL078595.2-201ENST00000605309 1780 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 AC005614.1-201ENST00000598952 3653 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 RNU12-2P-201ENST00000364789 156 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 SNORA68-201ENST00000384437 133 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 RNU6-636P-201ENST00000384598 107 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 MIR498-201ENST00000385134 124 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 RNU1-56P-201ENST00000391303 164 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 CREM-214ENST00000395887 849 ntTSL 5 BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 OR2W4P-201ENST00000406496 926 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 RN7SKP221-201ENST00000410420 301 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 FAM183DP-201ENST00000421987 399 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 FABP7P1-201ENST00000424004 391 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 SNX19-202ENST00000426933 888 ntTSL 2 BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 CREM-224ENST00000468236 582 ntTSL 3 BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 BZW1P2-201ENST00000473537 826 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 MARK2P8-201ENST00000476069 952 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 SNRPCP11-201ENST00000492453 205 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 MTCO3P9-201ENST00000506989 781 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 GOLGA5P1-201ENST00000507317 980 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 AC109458.1-201ENST00000508858 316 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 AC233724.10-201ENST00000510454 409 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 CR383658.1-201ENST00000514609 734 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 RNU6-760P-201ENST00000516078 97 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 PTTG3P-201ENST00000521862 606 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 AC131935.1-201ENST00000524621 333 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 AC013283.1-201ENST00000557282 492 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 GNG2-215ENST00000557376 573 ntTSL 4 BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 AC093283.1-201ENST00000565306 1075 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 AC025283.1-201ENST00000572039 734 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 AL354943.1-201ENST00000572103 781 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 AC090186.1-201ENST00000605991 572 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 AP005229.2-201ENST00000609980 697 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 MIR6889-201ENST00000613185 59 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 AC011472.4-201ENST00000615848 491 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 AL445649.1-201ENST00000615941 691 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 MIAT_exon1.1-201ENST00000617016 135 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 CCL14-202ENST00000618404 898 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 AC025287.2-201ENST00000621911 668 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 AC024940.5-201ENST00000622889 474 ntBASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC9.4□□□□□ -0.9
PDZRN3Q9UPQ7 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC9.4□□□□□ -0.91
PDZRN3Q9UPQ7 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
PDZRN3Q9UPQ7 AC022507.1-201ENST00000548349 1505 ntBASIC9.4□□□□□ -0.91
PDZRN3Q9UPQ7 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC9.4□□□□□ -0.91
PDZRN3Q9UPQ7 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC9.4□□□□□ -0.91
PDZRN3Q9UPQ7 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.91
PDZRN3Q9UPQ7 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 RBMX2P2-201ENST00000257020 946 ntBASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 RN7SKP36-201ENST00000363997 312 ntBASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 RNU4-68P-201ENST00000364314 141 ntBASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 MT-TR-201ENST00000387439 65 ntBASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 AL607077.1-201ENST00000401718 499 ntBASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 AL590004.1-201ENST00000405321 300 ntBASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 RPS27AP7-201ENST00000422792 455 ntBASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 MED28P4-201ENST00000433137 572 ntBASIC9.39□□□□□ -0.91
PDZRN3Q9UPQ7 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC9.39□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms