Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 RNA5SP346-201ENST00000363541 121 ntBASIC6.19□□□□□ -1.42
SPASTQ9UBP0 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 AC092642.1-201ENST00000392417 425 ntBASIC6.19□□□□□ -1.42
SPASTQ9UBP0 RPL7P58-201ENST00000402913 758 ntBASIC6.19□□□□□ -1.42
SPASTQ9UBP0 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 NME1P1-201ENST00000420914 382 ntBASIC6.19□□□□□ -1.42
SPASTQ9UBP0 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 VN1R38P-201ENST00000450265 887 ntBASIC6.19□□□□□ -1.42
SPASTQ9UBP0 PPIAP27-201ENST00000453800 265 ntBASIC6.19□□□□□ -1.42
SPASTQ9UBP0 AC023194.2-201ENST00000465398 406 ntBASIC6.19□□□□□ -1.42
SPASTQ9UBP0 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 AC098847.1-201ENST00000473094 348 ntBASIC6.19□□□□□ -1.42
SPASTQ9UBP0 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 RN7SKP248-201ENST00000516278 305 ntBASIC6.19□□□□□ -1.42
SPASTQ9UBP0 AC084337.1-201ENST00000524809 686 ntBASIC6.19□□□□□ -1.42
SPASTQ9UBP0 AC027369.2-201ENST00000528030 440 ntBASIC6.19□□□□□ -1.42
SPASTQ9UBP0 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 AP001823.1-201ENST00000604056 1003 ntBASIC6.19□□□□□ -1.42
SPASTQ9UBP0 MIR7159-201ENST00000620587 66 ntBASIC6.19□□□□□ -1.42
SPASTQ9UBP0 AC004836.1-201ENST00000623032 634 ntBASIC6.19□□□□□ -1.42
SPASTQ9UBP0 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SPASTQ9UBP0 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 RNA5SP435-201ENST00000364044 108 ntBASIC6.18□□□□□ -1.42
SPASTQ9UBP0 SNORA51.9-201ENST00000384295 124 ntBASIC6.18□□□□□ -1.42
SPASTQ9UBP0 MIR323B-201ENST00000385269 82 ntBASIC6.18□□□□□ -1.42
SPASTQ9UBP0 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 RPL23AP18-201ENST00000416139 468 ntBASIC6.18□□□□□ -1.42
SPASTQ9UBP0 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 NPM1P48-201ENST00000436002 853 ntBASIC6.18□□□□□ -1.42
SPASTQ9UBP0 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 AL355355.1-201ENST00000442900 793 ntBASIC6.18□□□□□ -1.42
SPASTQ9UBP0 HIGD1AP16-201ENST00000450986 258 ntBASIC6.18□□□□□ -1.42
SPASTQ9UBP0 PPIAP7-201ENST00000454070 489 ntBASIC6.18□□□□□ -1.42
SPASTQ9UBP0 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 RN7SL221P-201ENST00000466190 281 ntBASIC6.18□□□□□ -1.42
SPASTQ9UBP0 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 AP000620.1-201ENST00000527147 504 ntBASIC6.18□□□□□ -1.42
SPASTQ9UBP0 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 AL096712.1-201ENST00000614561 159 ntBASIC6.18□□□□□ -1.42
SPASTQ9UBP0 TCL6_3.1-201ENST00000619064 137 ntBASIC6.18□□□□□ -1.42
SPASTQ9UBP0 AC009120.7-201ENST00000623452 780 ntBASIC6.18□□□□□ -1.42
SPASTQ9UBP0 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SPASTQ9UBP0 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms