Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL20A1Q9P218 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
COL20A1Q9P218 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL20A1Q9P218 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
COL20A1Q9P218 MTCO1P28-201ENST00000574177 1528 ntBASIC7□□□□□ -1.29
COL20A1Q9P218 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7□□□□□ -1.29
COL20A1Q9P218 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC7□□□□□ -1.29
COL20A1Q9P218 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL20A1Q9P218 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL20A1Q9P218 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC7□□□□□ -1.29
COL20A1Q9P218 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL20A1Q9P218 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
COL20A1Q9P218 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
COL20A1Q9P218 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
COL20A1Q9P218 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
COL20A1Q9P218 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7□□□□□ -1.29
COL20A1Q9P218 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC7□□□□□ -1.29
COL20A1Q9P218 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7□□□□□ -1.29
COL20A1Q9P218 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL20A1Q9P218 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL20A1Q9P218 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL20A1Q9P218 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.99□□□□□ -1.29
COL20A1Q9P218 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL20A1Q9P218 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL20A1Q9P218 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL20A1Q9P218 MTND4P21-201ENST00000453886 1357 ntBASIC6.99□□□□□ -1.29
COL20A1Q9P218 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.99□□□□□ -1.29
COL20A1Q9P218 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
COL20A1Q9P218 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
COL20A1Q9P218 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL20A1Q9P218 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.99□□□□□ -1.29
COL20A1Q9P218 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL20A1Q9P218 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC6.99□□□□□ -1.29
COL20A1Q9P218 OR1F12-201ENST00000402365 945 ntBASIC6.99□□□□□ -1.29
COL20A1Q9P218 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.99□□□□□ -1.29
COL20A1Q9P218 SLC20A1P1-201ENST00000413906 956 ntBASIC6.99□□□□□ -1.29
COL20A1Q9P218 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.99□□□□□ -1.29
COL20A1Q9P218 RPS3P2-201ENST00000421346 701 ntBASIC6.99□□□□□ -1.29
COL20A1Q9P218 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC6.99□□□□□ -1.29
COL20A1Q9P218 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.99□□□□□ -1.29
COL20A1Q9P218 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.99□□□□□ -1.29
COL20A1Q9P218 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.99□□□□□ -1.29
COL20A1Q9P218 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL20A1Q9P218 UGT2A3P7-201ENST00000510485 734 ntBASIC6.99□□□□□ -1.29
COL20A1Q9P218 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC6.99□□□□□ -1.29
COL20A1Q9P218 AC114781.3-201ENST00000512083 142 ntBASIC6.99□□□□□ -1.29
COL20A1Q9P218 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.99□□□□□ -1.29
COL20A1Q9P218 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC6.99□□□□□ -1.29
COL20A1Q9P218 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
COL20A1Q9P218 KCTD9P4-201ENST00000526766 1166 ntBASIC6.99□□□□□ -1.29
COL20A1Q9P218 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.99□□□□□ -1.29
COL20A1Q9P218 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.99□□□□□ -1.29
COL20A1Q9P218 RPA2P1-201ENST00000556557 721 ntBASIC6.99□□□□□ -1.29
COL20A1Q9P218 MIR3614-201ENST00000581261 86 ntBASIC6.99□□□□□ -1.29
COL20A1Q9P218 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.99□□□□□ -1.29
COL20A1Q9P218 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC6.99□□□□□ -1.29
COL20A1Q9P218 AC009032.1-201ENST00000617574 431 ntBASIC6.99□□□□□ -1.29
COL20A1Q9P218 AL590410.1-201ENST00000617925 333 ntBASIC6.99□□□□□ -1.29
COL20A1Q9P218 AC096708.4-201ENST00000620563 552 ntBASIC6.99□□□□□ -1.29
COL20A1Q9P218 AC020978.9-201ENST00000624380 1141 ntBASIC6.99□□□□□ -1.29
COL20A1Q9P218 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC6.99□□□□□ -1.29
COL20A1Q9P218 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL20A1Q9P218 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL20A1Q9P218 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL20A1Q9P218 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
COL20A1Q9P218 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
COL20A1Q9P218 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL20A1Q9P218 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL20A1Q9P218 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL20A1Q9P218 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.98□□□□□ -1.29
COL20A1Q9P218 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.98□□□□□ -1.29
COL20A1Q9P218 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.98□□□□□ -1.29
COL20A1Q9P218 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.98□□□□□ -1.29
COL20A1Q9P218 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
COL20A1Q9P218 AC114876.1-201ENST00000490962 1366 ntBASIC6.98□□□□□ -1.29
COL20A1Q9P218 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
COL20A1Q9P218 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.98□□□□□ -1.29
COL20A1Q9P218 AC009135.2-201ENST00000624136 1768 ntBASIC6.98□□□□□ -1.29
COL20A1Q9P218 Y_RNA.110-201ENST00000363220 99 ntBASIC6.98□□□□□ -1.29
COL20A1Q9P218 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.98□□□□□ -1.29
COL20A1Q9P218 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.98□□□□□ -1.29
COL20A1Q9P218 AL096800.1-201ENST00000405326 893 ntBASIC6.98□□□□□ -1.29
COL20A1Q9P218 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.98□□□□□ -1.29
COL20A1Q9P218 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.98□□□□□ -1.29
COL20A1Q9P218 GAPDHP75-201ENST00000433910 943 ntBASIC6.98□□□□□ -1.29
COL20A1Q9P218 ZFAND6P1-201ENST00000434138 605 ntBASIC6.98□□□□□ -1.29
COL20A1Q9P218 AL392003.1-201ENST00000434394 243 ntBASIC6.98□□□□□ -1.29
COL20A1Q9P218 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.98□□□□□ -1.29
COL20A1Q9P218 CFL1P4-201ENST00000451536 498 ntBASIC6.98□□□□□ -1.29
COL20A1Q9P218 C1DP3-201ENST00000455013 423 ntBASIC6.98□□□□□ -1.29
COL20A1Q9P218 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.98□□□□□ -1.29
COL20A1Q9P218 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.98□□□□□ -1.29
COL20A1Q9P218 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.98□□□□□ -1.29
COL20A1Q9P218 AC092451.2-201ENST00000538746 658 ntBASIC6.98□□□□□ -1.29
COL20A1Q9P218 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.98□□□□□ -1.29
COL20A1Q9P218 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.98□□□□□ -1.29
COL20A1Q9P218 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.98□□□□□ -1.29
COL20A1Q9P218 VN1R81P-201ENST00000602085 372 ntBASIC6.98□□□□□ -1.29
COL20A1Q9P218 AC100767.2-201ENST00000604840 693 ntBASIC6.98□□□□□ -1.29
COL20A1Q9P218 AC141002.1-201ENST00000607025 279 ntBASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms