Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.38□□□□□ -1.39
SIX2Q9NPC8 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.38□□□□□ -1.39
SIX2Q9NPC8 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SIX2Q9NPC8 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
SIX2Q9NPC8 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
SIX2Q9NPC8 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
SIX2Q9NPC8 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SIX2Q9NPC8 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SIX2Q9NPC8 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SIX2Q9NPC8 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.38□□□□□ -1.39
SIX2Q9NPC8 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.38□□□□□ -1.39
SIX2Q9NPC8 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SIX2Q9NPC8 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.38□□□□□ -1.39
SIX2Q9NPC8 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
SIX2Q9NPC8 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.38□□□□□ -1.39
SIX2Q9NPC8 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SIX2Q9NPC8 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.37□□□□□ -1.39
SIX2Q9NPC8 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.37□□□□□ -1.39
SIX2Q9NPC8 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SIX2Q9NPC8 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC6.37□□□□□ -1.39
SIX2Q9NPC8 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SIX2Q9NPC8 AL355834.1-201ENST00000556602 3965 ntBASIC6.37□□□□□ -1.39
SIX2Q9NPC8 SELENOWP1-201ENST00000322792 252 ntBASIC6.37□□□□□ -1.39
SIX2Q9NPC8 U3.10-201ENST00000364459 214 ntBASIC6.37□□□□□ -1.39
SIX2Q9NPC8 AL359885.1-201ENST00000415786 903 ntBASIC6.37□□□□□ -1.39
SIX2Q9NPC8 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.37□□□□□ -1.39
SIX2Q9NPC8 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.37□□□□□ -1.39
SIX2Q9NPC8 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.37□□□□□ -1.39
SIX2Q9NPC8 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.37□□□□□ -1.39
SIX2Q9NPC8 OR52I1-201ENST00000450052 1050 ntBASIC6.37□□□□□ -1.39
SIX2Q9NPC8 RBMY2BP-202ENST00000451071 1156 ntBASIC6.37□□□□□ -1.39
SIX2Q9NPC8 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SIX2Q9NPC8 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.37□□□□□ -1.39
SIX2Q9NPC8 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.37□□□□□ -1.39
SIX2Q9NPC8 AC009879.1-201ENST00000520029 839 ntBASIC6.37□□□□□ -1.39
SIX2Q9NPC8 AC092332.1-201ENST00000563684 829 ntBASIC6.37□□□□□ -1.39
SIX2Q9NPC8 AC090826.1-203ENST00000569235 490 ntBASIC6.37□□□□□ -1.39
SIX2Q9NPC8 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SIX2Q9NPC8 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.37□□□□□ -1.39
SIX2Q9NPC8 TXNP4-201ENST00000575018 310 ntBASIC6.37□□□□□ -1.39
SIX2Q9NPC8 AP001357.1-201ENST00000586304 1053 ntBASIC6.37□□□□□ -1.39
SIX2Q9NPC8 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.37□□□□□ -1.39
SIX2Q9NPC8 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC6.37□□□□□ -1.39
SIX2Q9NPC8 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.37□□□□□ -1.39
SIX2Q9NPC8 AC093388.1-201ENST00000609166 430 ntBASIC6.37□□□□□ -1.39
SIX2Q9NPC8 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.37□□□□□ -1.39
SIX2Q9NPC8 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
SIX2Q9NPC8 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SIX2Q9NPC8 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SIX2Q9NPC8 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SIX2Q9NPC8 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SIX2Q9NPC8 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SIX2Q9NPC8 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SIX2Q9NPC8 AC012254.3-201ENST00000591183 2117 ntBASIC6.37□□□□□ -1.39
SIX2Q9NPC8 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SIX2Q9NPC8 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.36□□□□□ -1.39
SIX2Q9NPC8 MFSD8-239ENST00000641590 2479 ntBASIC6.36□□□□□ -1.39
SIX2Q9NPC8 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.36□□□□□ -1.39
SIX2Q9NPC8 PPBPP2-201ENST00000513150 1362 ntBASIC6.36□□□□□ -1.39
SIX2Q9NPC8 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SIX2Q9NPC8 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SIX2Q9NPC8 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.36□□□□□ -1.39
SIX2Q9NPC8 RN7SKP78-201ENST00000364711 318 ntBASIC6.36□□□□□ -1.39
SIX2Q9NPC8 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.36□□□□□ -1.39
SIX2Q9NPC8 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.36□□□□□ -1.39
SIX2Q9NPC8 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.36□□□□□ -1.39
SIX2Q9NPC8 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.36□□□□□ -1.39
SIX2Q9NPC8 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SIX2Q9NPC8 AC096775.1-201ENST00000437724 448 ntBASIC6.36□□□□□ -1.39
SIX2Q9NPC8 RPSAP40-201ENST00000442343 891 ntBASIC6.36□□□□□ -1.39
SIX2Q9NPC8 BMS1P10-201ENST00000443754 1120 ntBASIC6.36□□□□□ -1.39
SIX2Q9NPC8 GEMIN2P1-201ENST00000454246 752 ntBASIC6.36□□□□□ -1.39
SIX2Q9NPC8 RPL12P39-201ENST00000455456 496 ntBASIC6.36□□□□□ -1.39
SIX2Q9NPC8 AC093719.1-201ENST00000480427 441 ntBASIC6.36□□□□□ -1.39
SIX2Q9NPC8 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.36□□□□□ -1.39
SIX2Q9NPC8 HSD3BP3-201ENST00000514706 994 ntBASIC6.36□□□□□ -1.39
SIX2Q9NPC8 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SIX2Q9NPC8 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.36□□□□□ -1.39
SIX2Q9NPC8 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.36□□□□□ -1.39
SIX2Q9NPC8 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.36□□□□□ -1.39
SIX2Q9NPC8 AC002519.2-203ENST00000567043 837 ntBASIC6.36□□□□□ -1.39
SIX2Q9NPC8 GARSP1-201ENST00000570895 719 ntBASIC6.36□□□□□ -1.39
SIX2Q9NPC8 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.36□□□□□ -1.39
SIX2Q9NPC8 AC092681.3-201ENST00000609463 678 ntBASIC6.36□□□□□ -1.39
SIX2Q9NPC8 AC096708.4-201ENST00000620563 552 ntBASIC6.36□□□□□ -1.39
SIX2Q9NPC8 AC009950.2-201ENST00000636548 183 ntBASIC6.36□□□□□ -1.39
SIX2Q9NPC8 AC007114.2-201ENST00000576014 4281 ntBASIC6.36□□□□□ -1.39
SIX2Q9NPC8 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SIX2Q9NPC8 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
SIX2Q9NPC8 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SIX2Q9NPC8 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.36□□□□□ -1.39
SIX2Q9NPC8 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 AC090181.3-201ENST00000624777 1514 ntBASIC6.35□□□□□ -1.39
SIX2Q9NPC8 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.35□□□□□ -1.39
SIX2Q9NPC8 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms