Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.65□□□□□ -1.51
CCNB1IP1Q9NPC3 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCNB1IP1Q9NPC3 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCNB1IP1Q9NPC3 AC004076.2-201ENST00000620532 3323 ntBASIC5.65□□□□□ -1.51
CCNB1IP1Q9NPC3 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCNB1IP1Q9NPC3 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CCNB1IP1Q9NPC3 AC123769.1-201ENST00000530992 3192 ntBASIC5.65□□□□□ -1.51
CCNB1IP1Q9NPC3 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.65□□□□□ -1.51
CCNB1IP1Q9NPC3 AC217777.1-201ENST00000570034 1471 ntBASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 SNORD16-201ENST00000362803 99 ntBASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 U3.10-201ENST00000364459 214 ntBASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 RNA5SP485-201ENST00000365053 119 ntBASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 VIM2P-201ENST00000402383 1294 ntBASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 UBTFL2-201ENST00000411859 1191 ntBASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 RPS18P1-201ENST00000447840 458 ntBASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 AL162739.1-201ENST00000450606 307 ntBASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 RN7SL393P-201ENST00000463588 296 ntBASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 AC012123.2-201ENST00000485809 248 ntBASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 AC114324.2-202ENST00000503812 134 ntBASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 RNU6-1334P-201ENST00000516032 105 ntBASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 MIR212-201ENST00000586026 110 ntBASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 LINC02495-203ENST00000636704 242 ntBASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCNB1IP1Q9NPC3 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 AC114774.1-201ENST00000507410 1770 ntBASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 U3.23-201ENST00000391132 200 ntBASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 RPS27AP6-201ENST00000427962 448 ntBASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 GAPDHP19-201ENST00000431768 1005 ntBASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 AL022324.2-201ENST00000434827 780 ntBASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 RN7SL352P-201ENST00000466002 277 ntBASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 TOMM22P4-201ENST00000511318 336 ntBASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 AC027279.4-201ENST00000624371 2072 ntBASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCNB1IP1Q9NPC3 RPL31P11-201ENST00000426558 1558 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms