Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 USP9YP21-201ENST00000420603 432 ntBASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 NDUFA5P10-201ENST00000432147 357 ntBASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 Z84478.1-201ENST00000438230 1219 ntBASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 OR2L9P-201ENST00000444456 913 ntBASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 RPL7AP71-201ENST00000451120 739 ntBASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 RN7SL390P-201ENST00000470634 284 ntBASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 MTCO3P35-201ENST00000485582 781 ntBASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 AC026826.1-201ENST00000493002 361 ntBASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 RPS26P24-201ENST00000497656 331 ntBASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 AC105313.1-201ENST00000509121 353 ntBASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 MTCYBP44-201ENST00000514835 823 ntBASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 RNU6-1028P-201ENST00000517164 93 ntBASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 AC011611.5-201ENST00000552477 578 ntBASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 AC145350.1-201ENST00000567426 208 ntBASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 MIR378C-201ENST00000578683 81 ntBASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 RN7SL32P-201ENST00000580514 281 ntBASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 AC087575.1-201ENST00000585087 229 ntBASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 AC020914.7-201ENST00000594477 545 ntBASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 GAS5-AS1-201ENST00000602767 694 ntBASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 AC009220.2-201ENST00000489759 1751 ntBASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.82□□□□□ -1.32
TRIM39Q9HCM9 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 CD2-201ENST00000369477 478 ntTSL 2 BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 HNRNPH1P2-201ENST00000396845 1210 ntBASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 AL049545.1-201ENST00000401856 572 ntBASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 RNU4ATAC2P-201ENST00000408674 126 ntBASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 RN7SKP91-201ENST00000410852 288 ntBASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 DUTP4-201ENST00000424782 475 ntBASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 AC005189.1-201ENST00000431286 310 ntBASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 AL451063.1-201ENST00000450164 1133 ntBASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 RPL5P12-201ENST00000477071 851 ntBASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 AC093719.1-201ENST00000480427 441 ntBASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 AC108120.2-201ENST00000512973 294 ntBASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 RNA5SP116-201ENST00000516132 98 ntBASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 AP005902.2-201ENST00000518393 307 ntBASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 AC089984.3-201ENST00000552838 363 ntBASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 PPIAP6-201ENST00000557078 499 ntBASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 AC004908.1-201ENST00000606572 541 ntBASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 AC104985.3-201ENST00000623479 597 ntBASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 AC079416.3-201ENST00000624479 549 ntBASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 AC090897.3-201ENST00000636973 1157 ntBASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 AC015871.3-201ENST00000618835 2261 ntBASIC6.81□□□□□ -1.32
TRIM39Q9HCM9 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms