Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RPAP1Q9BWH6 AL117339.4-201ENST00000608335 7063 ntBASIC7.4□□□□□ -1.22
RPAP1Q9BWH6 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RPAP1Q9BWH6 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RPAP1Q9BWH6 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RPAP1Q9BWH6 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7.4□□□□□ -1.22
RPAP1Q9BWH6 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC7.4□□□□□ -1.22
RPAP1Q9BWH6 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RPAP1Q9BWH6 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC7.4□□□□□ -1.22
RPAP1Q9BWH6 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RPAP1Q9BWH6 AL096711.1-201ENST00000404780 554 ntBASIC7.4□□□□□ -1.22
RPAP1Q9BWH6 RN7SKP229-201ENST00000410465 302 ntBASIC7.4□□□□□ -1.22
RPAP1Q9BWH6 RPS26P38-201ENST00000414476 348 ntBASIC7.4□□□□□ -1.22
RPAP1Q9BWH6 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC7.4□□□□□ -1.22
RPAP1Q9BWH6 RPL34P27-201ENST00000428810 349 ntBASIC7.4□□□□□ -1.22
RPAP1Q9BWH6 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC7.4□□□□□ -1.22
RPAP1Q9BWH6 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.4□□□□□ -1.22
RPAP1Q9BWH6 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.4□□□□□ -1.22
RPAP1Q9BWH6 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC7.4□□□□□ -1.22
RPAP1Q9BWH6 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.4□□□□□ -1.22
RPAP1Q9BWH6 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7.4□□□□□ -1.22
RPAP1Q9BWH6 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC7.4□□□□□ -1.22
RPAP1Q9BWH6 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC7.4□□□□□ -1.22
RPAP1Q9BWH6 AL352984.2-202ENST00000613699 155 ntBASIC7.4□□□□□ -1.22
RPAP1Q9BWH6 AC021422.1-201ENST00000621212 473 ntBASIC7.4□□□□□ -1.22
RPAP1Q9BWH6 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC7.4□□□□□ -1.22
RPAP1Q9BWH6 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC7.4□□□□□ -1.22
RPAP1Q9BWH6 UBA3-213ENST00000631029 123 ntTSL 5 BASIC7.4□□□□□ -1.22
RPAP1Q9BWH6 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC7.4□□□□□ -1.22
RPAP1Q9BWH6 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
RPAP1Q9BWH6 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RPAP1Q9BWH6 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
RPAP1Q9BWH6 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RPAP1Q9BWH6 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
RPAP1Q9BWH6 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RPAP1Q9BWH6 AL359091.1-201ENST00000449048 1734 ntBASIC7.4□□□□□ -1.23
RPAP1Q9BWH6 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RPAP1Q9BWH6 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 USP9YP3-201ENST00000434481 1766 ntBASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 RNU1-134P-201ENST00000362935 165 ntBASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 RPS7P8-201ENST00000418311 581 ntBASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 AC005077.1-201ENST00000449226 375 ntBASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 SUMO2P10-201ENST00000452006 288 ntBASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 AC008945.1-201ENST00000505144 499 ntBASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 Y_RNA.710-201ENST00000516975 110 ntBASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 AC020978.7-201ENST00000575953 1187 ntBASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 MIR4443-201ENST00000585052 53 ntBASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 AC027334.1-201ENST00000603257 310 ntBASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 AC008555.7-201ENST00000605008 583 ntBASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 AL137067.2-201ENST00000621202 131 ntBASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 ZNF101P1-201ENST00000435701 1720 ntBASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 RBMY1HP-201ENST00000382759 1389 ntBASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RPAP1Q9BWH6 AL121768.1-201ENST00000613917 2544 ntBASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 OR52B3P-201ENST00000314715 928 ntBASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 AC087752.1-201ENST00000391360 558 ntBASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 AC245096.1-201ENST00000413104 546 ntBASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 RPL31P15-201ENST00000449770 338 ntBASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 AC112187.1-201ENST00000455837 479 ntBASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 AC114728.1-201ENST00000488289 483 ntBASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 RNA5SP438-201ENST00000516561 112 ntBASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 CETN3-206ENST00000522864 738 ntTSL 3 BASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 AC020916.2-201ENST00000591242 360 ntBASIC7.38□□□□□ -1.23
RPAP1Q9BWH6 AL352984.2-201ENST00000611153 546 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms