Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC8.6□□□□□ -1.03
SIN3AQ96ST3 AC067773.1-201ENST00000603284 1094 ntBASIC8.6□□□□□ -1.03
SIN3AQ96ST3 AP005431.1-201ENST00000618479 319 ntBASIC8.6□□□□□ -1.03
SIN3AQ96ST3 AC129915.3-201ENST00000634128 948 ntBASIC8.6□□□□□ -1.03
SIN3AQ96ST3 AC114876.1-201ENST00000490962 1366 ntBASIC8.6□□□□□ -1.03
SIN3AQ96ST3 MFSD8-219ENST00000641228 2559 ntBASIC8.6□□□□□ -1.03
SIN3AQ96ST3 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
SIN3AQ96ST3 AC084782.1-201ENST00000564401 2465 ntBASIC8.59□□□□□ -1.03
SIN3AQ96ST3 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SIN3AQ96ST3 AC002090.1-201ENST00000625000 2138 ntBASIC8.59□□□□□ -1.03
SIN3AQ96ST3 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC8.59□□□□□ -1.03
SIN3AQ96ST3 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SIN3AQ96ST3 MIR621-201ENST00000384919 96 ntBASIC8.59□□□□□ -1.03
SIN3AQ96ST3 AL096800.1-201ENST00000405326 893 ntBASIC8.59□□□□□ -1.03
SIN3AQ96ST3 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC8.59□□□□□ -1.03
SIN3AQ96ST3 PCNPP2-201ENST00000441651 455 ntBASIC8.59□□□□□ -1.03
SIN3AQ96ST3 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC8.59□□□□□ -1.03
SIN3AQ96ST3 AL603882.1-201ENST00000463059 681 ntBASIC8.59□□□□□ -1.03
SIN3AQ96ST3 PCNAP4-201ENST00000532690 730 ntBASIC8.59□□□□□ -1.03
SIN3AQ96ST3 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC8.59□□□□□ -1.03
SIN3AQ96ST3 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC8.59□□□□□ -1.03
SIN3AQ96ST3 AL049779.3-201ENST00000557141 606 ntBASIC8.59□□□□□ -1.03
SIN3AQ96ST3 AL356801.1-201ENST00000559320 294 ntBASIC8.59□□□□□ -1.03
SIN3AQ96ST3 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC8.59□□□□□ -1.03
SIN3AQ96ST3 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC8.59□□□□□ -1.03
SIN3AQ96ST3 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC8.59□□□□□ -1.03
SIN3AQ96ST3 AL138895.2-201ENST00000603019 178 ntBASIC8.59□□□□□ -1.03
SIN3AQ96ST3 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC8.59□□□□□ -1.03
SIN3AQ96ST3 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC8.59□□□□□ -1.03
SIN3AQ96ST3 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SIN3AQ96ST3 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
SIN3AQ96ST3 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SIN3AQ96ST3 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SIN3AQ96ST3 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
SIN3AQ96ST3 PARP4P2-201ENST00000446672 3326 ntBASIC8.59□□□□□ -1.04
SIN3AQ96ST3 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SIN3AQ96ST3 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SIN3AQ96ST3 ATP5A1P4-201ENST00000556888 1605 ntBASIC8.58□□□□□ -1.04
SIN3AQ96ST3 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC8.58□□□□□ -1.04
SIN3AQ96ST3 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SIN3AQ96ST3 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SIN3AQ96ST3 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC8.58□□□□□ -1.04
SIN3AQ96ST3 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
SIN3AQ96ST3 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
SIN3AQ96ST3 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SIN3AQ96ST3 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
SIN3AQ96ST3 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
SIN3AQ96ST3 RN7SKP128-201ENST00000364270 303 ntBASIC8.58□□□□□ -1.04
SIN3AQ96ST3 RNA5-8SP5-201ENST00000365304 152 ntBASIC8.58□□□□□ -1.04
SIN3AQ96ST3 MIR1203-201ENST00000408812 85 ntBASIC8.58□□□□□ -1.04
SIN3AQ96ST3 MRPL53P1-201ENST00000414323 319 ntBASIC8.58□□□□□ -1.04
SIN3AQ96ST3 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
SIN3AQ96ST3 AL365220.1-201ENST00000432923 399 ntBASIC8.58□□□□□ -1.04
SIN3AQ96ST3 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC8.58□□□□□ -1.04
SIN3AQ96ST3 AC092865.4-201ENST00000477936 615 ntBASIC8.58□□□□□ -1.04
SIN3AQ96ST3 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC8.58□□□□□ -1.04
SIN3AQ96ST3 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC8.58□□□□□ -1.04
SIN3AQ96ST3 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC8.58□□□□□ -1.04
SIN3AQ96ST3 AC079315.1-201ENST00000602952 623 ntBASIC8.58□□□□□ -1.04
SIN3AQ96ST3 AL136131.3-201ENST00000607600 188 ntBASIC8.58□□□□□ -1.04
SIN3AQ96ST3 AC069234.4-201ENST00000621276 412 ntBASIC8.58□□□□□ -1.04
SIN3AQ96ST3 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC8.58□□□□□ -1.04
SIN3AQ96ST3 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC8.58□□□□□ -1.04
SIN3AQ96ST3 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SIN3AQ96ST3 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
SIN3AQ96ST3 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC8.58□□□□□ -1.04
SIN3AQ96ST3 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SIN3AQ96ST3 AC027088.4-201ENST00000611559 1947 ntBASIC8.58□□□□□ -1.04
SIN3AQ96ST3 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
SIN3AQ96ST3 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
SIN3AQ96ST3 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC8.58□□□□□ -1.04
SIN3AQ96ST3 PRLR-208ENST00000509140 1610 ntTSL 5 BASIC8.58□□□□□ -1.04
SIN3AQ96ST3 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC8.58□□□□□ -1.04
SIN3AQ96ST3 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
SIN3AQ96ST3 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SIN3AQ96ST3 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
SIN3AQ96ST3 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
SIN3AQ96ST3 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC8.57□□□□□ -1.04
SIN3AQ96ST3 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
SIN3AQ96ST3 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC8.57□□□□□ -1.04
SIN3AQ96ST3 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
SIN3AQ96ST3 PKIB-203ENST00000368446 556 ntTSL 2 BASIC8.57□□□□□ -1.04
SIN3AQ96ST3 RN7SKP29-201ENST00000410957 272 ntBASIC8.57□□□□□ -1.04
SIN3AQ96ST3 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SIN3AQ96ST3 AC092651.1-201ENST00000426110 312 ntBASIC8.57□□□□□ -1.04
SIN3AQ96ST3 AC245884.2-201ENST00000426257 404 ntBASIC8.57□□□□□ -1.04
SIN3AQ96ST3 HNRNPA1P18-201ENST00000433537 927 ntBASIC8.57□□□□□ -1.04
SIN3AQ96ST3 RPS3AP38-201ENST00000435889 763 ntBASIC8.57□□□□□ -1.04
SIN3AQ96ST3 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC8.57□□□□□ -1.04
SIN3AQ96ST3 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC8.57□□□□□ -1.04
SIN3AQ96ST3 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SIN3AQ96ST3 AC253576.1-201ENST00000511645 1156 ntBASIC8.57□□□□□ -1.04
SIN3AQ96ST3 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SIN3AQ96ST3 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC8.57□□□□□ -1.04
SIN3AQ96ST3 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC8.57□□□□□ -1.04
SIN3AQ96ST3 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC8.57□□□□□ -1.04
SIN3AQ96ST3 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC8.57□□□□□ -1.04
SIN3AQ96ST3 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
SIN3AQ96ST3 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
SIN3AQ96ST3 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms