Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC9.72□□□□□ -0.85
IFT140Q96RY7 VDAC2P4-201ENST00000452925 711 ntBASIC9.72□□□□□ -0.85
IFT140Q96RY7 AP004607.2-201ENST00000533949 322 ntBASIC9.72□□□□□ -0.85
IFT140Q96RY7 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC9.72□□□□□ -0.85
IFT140Q96RY7 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
IFT140Q96RY7 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC9.72□□□□□ -0.85
IFT140Q96RY7 AL445647.2-201ENST00000615170 130 ntBASIC9.72□□□□□ -0.85
IFT140Q96RY7 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC9.72□□□□□ -0.85
IFT140Q96RY7 AC022726.2-201ENST00000634673 547 ntBASIC9.72□□□□□ -0.85
IFT140Q96RY7 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
IFT140Q96RY7 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
IFT140Q96RY7 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC9.72□□□□□ -0.85
IFT140Q96RY7 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
IFT140Q96RY7 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
IFT140Q96RY7 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
IFT140Q96RY7 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
IFT140Q96RY7 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
IFT140Q96RY7 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
IFT140Q96RY7 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC9.71□□□□□ -0.85
IFT140Q96RY7 DST-206ENST00000370788 17657 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
IFT140Q96RY7 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
IFT140Q96RY7 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
IFT140Q96RY7 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
IFT140Q96RY7 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
IFT140Q96RY7 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
IFT140Q96RY7 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
IFT140Q96RY7 NENFP1-201ENST00000419476 466 ntBASIC9.71□□□□□ -0.86
IFT140Q96RY7 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC9.71□□□□□ -0.86
IFT140Q96RY7 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC9.71□□□□□ -0.86
IFT140Q96RY7 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC9.71□□□□□ -0.86
IFT140Q96RY7 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC9.71□□□□□ -0.86
IFT140Q96RY7 AC093267.1-201ENST00000489176 961 ntBASIC9.71□□□□□ -0.86
IFT140Q96RY7 AC137768.1-201ENST00000549998 553 ntBASIC9.71□□□□□ -0.86
IFT140Q96RY7 HSPE1P2-201ENST00000554777 306 ntBASIC9.71□□□□□ -0.86
IFT140Q96RY7 MRPS21P7-201ENST00000566937 238 ntBASIC9.71□□□□□ -0.86
IFT140Q96RY7 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
IFT140Q96RY7 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
IFT140Q96RY7 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
IFT140Q96RY7 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
IFT140Q96RY7 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
IFT140Q96RY7 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
IFT140Q96RY7 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
IFT140Q96RY7 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
IFT140Q96RY7 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
IFT140Q96RY7 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
IFT140Q96RY7 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
IFT140Q96RY7 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
IFT140Q96RY7 RN7SKP28-201ENST00000364770 305 ntBASIC9.7□□□□□ -0.86
IFT140Q96RY7 AC097721.1-201ENST00000427150 1253 ntBASIC9.7□□□□□ -0.86
IFT140Q96RY7 HSPA8P18-201ENST00000439846 1928 ntBASIC9.7□□□□□ -0.86
IFT140Q96RY7 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC9.7□□□□□ -0.86
IFT140Q96RY7 DNAJB5P1-201ENST00000454004 806 ntBASIC9.7□□□□□ -0.86
IFT140Q96RY7 AC103563.5-201ENST00000455643 364 ntBASIC9.7□□□□□ -0.86
IFT140Q96RY7 RN7SL51P-201ENST00000468230 285 ntBASIC9.7□□□□□ -0.86
IFT140Q96RY7 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC9.7□□□□□ -0.86
IFT140Q96RY7 AC139365.2-201ENST00000517972 253 ntBASIC9.7□□□□□ -0.86
IFT140Q96RY7 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
IFT140Q96RY7 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
IFT140Q96RY7 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC9.7□□□□□ -0.86
IFT140Q96RY7 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC9.7□□□□□ -0.86
IFT140Q96RY7 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC9.7□□□□□ -0.86
IFT140Q96RY7 AL118522.2-201ENST00000616045 615 ntBASIC9.7□□□□□ -0.86
IFT140Q96RY7 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
IFT140Q96RY7 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC9.7□□□□□ -0.86
IFT140Q96RY7 AP002505.2-201ENST00000623585 696 ntBASIC9.7□□□□□ -0.86
IFT140Q96RY7 FLJ42393-201ENST00000623801 2270 ntBASIC9.7□□□□□ -0.86
IFT140Q96RY7 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC9.7□□□□□ -0.86
IFT140Q96RY7 LINC01739-205ENST00000641890 573 ntBASIC9.7□□□□□ -0.86
IFT140Q96RY7 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC9.7□□□□□ -0.86
IFT140Q96RY7 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
IFT140Q96RY7 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC9.69□□□□□ -0.86
IFT140Q96RY7 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
IFT140Q96RY7 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
IFT140Q96RY7 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
IFT140Q96RY7 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
IFT140Q96RY7 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
IFT140Q96RY7 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC9.69□□□□□ -0.86
IFT140Q96RY7 RNA5SP335-201ENST00000363817 110 ntBASIC9.69□□□□□ -0.86
IFT140Q96RY7 IGKV1OR22-5-201ENST00000458718 354 ntBASIC9.69□□□□□ -0.86
IFT140Q96RY7 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
IFT140Q96RY7 AC074050.1-201ENST00000563247 211 ntBASIC9.69□□□□□ -0.86
IFT140Q96RY7 AC012616.1-201ENST00000600294 197 ntBASIC9.69□□□□□ -0.86
IFT140Q96RY7 AC132068.1-201ENST00000623805 459 ntBASIC9.69□□□□□ -0.86
IFT140Q96RY7 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
IFT140Q96RY7 MAPK10-344ENST00000641718 3746 ntBASIC9.69□□□□□ -0.86
IFT140Q96RY7 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.86
IFT140Q96RY7 GDA-209ENST00000545168 5362 ntTSL 2 BASIC9.69□□□□□ -0.86
IFT140Q96RY7 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
IFT140Q96RY7 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
IFT140Q96RY7 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
IFT140Q96RY7 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
IFT140Q96RY7 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
IFT140Q96RY7 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC9.69□□□□□ -0.86
IFT140Q96RY7 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
IFT140Q96RY7 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
IFT140Q96RY7 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
IFT140Q96RY7 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
IFT140Q96RY7 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
IFT140Q96RY7 ZNF658B-201ENST00000602828 3408 ntBASIC9.68□□□□□ -0.86
IFT140Q96RY7 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms