Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AL451142.1-201ENST00000375867 775 ntBASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AC016397.1-201ENST00000412463 242 ntBASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AL139415.1-201ENST00000424862 352 ntBASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 VDAC1P6-201ENST00000430062 855 ntBASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 IGBP1P1-201ENST00000554337 1009 ntBASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 CLMN-206ENST00000556441 452 ntTSL 5 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 NMNAT1P5-201ENST00000559657 841 ntBASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AC133644.2-201ENST00000608142 540 ntBASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 AC105114.1-201ENST00000624795 1862 ntBASIC3.99□□□□□ -1.77
ALMS1Q8TCU4 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 YES1P1-201ENST00000418510 1628 ntBASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 RNU4ATAC2P-201ENST00000408674 126 ntBASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 NMD3P2-201ENST00000421815 761 ntBASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 AC097721.1-201ENST00000427150 1253 ntBASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 AC091390.2-201ENST00000432573 374 ntBASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 AC245047.2-201ENST00000441060 530 ntBASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 AC005297.1-201ENST00000444765 862 ntBASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 AC104785.1-201ENST00000603220 588 ntBASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 ZNF790-206ENST00000613249 2183 ntAPPRIS P1 TSL 4 BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 NBAS-201ENST00000281513 7281 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 AL359091.1-201ENST00000449048 1734 ntBASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 AC004158.1-201ENST00000564508 4319 ntBASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 PTCD2P2-201ENST00000415579 1095 ntBASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 DNAJB5P1-201ENST00000454004 806 ntBASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 OR5AZ1P-201ENST00000527448 943 ntBASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC3.98□□□□□ -1.77
ALMS1Q8TCU4 AC020765.1-201ENST00000604296 328 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms