Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 RNA5SP453-201ENST00000362503 119 ntBASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 RNU1-84P-201ENST00000365447 164 ntBASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 RPL11P3-201ENST00000395256 523 ntBASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 VIM2P-201ENST00000402383 1294 ntBASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 AC024937.2-201ENST00000411669 1242 ntBASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 METTL15P3-201ENST00000415522 1221 ntBASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 PTCD2P2-201ENST00000415579 1095 ntBASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 MICG-208ENST00000416822 132 ntBASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 RANP7-201ENST00000418085 644 ntBASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 EMC3-AS1-205ENST00000438698 534 ntBASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 AC239800.1-201ENST00000442049 719 ntBASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 CCDC11P1-201ENST00000503137 1162 ntBASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 RBMS2P1-201ENST00000525031 1226 ntBASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 AL133399.1-201ENST00000527476 298 ntBASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 AL163952.1-202ENST00000569625 600 ntBASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 RN7SL131P-201ENST00000579043 256 ntBASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 AC090241.1-201ENST00000587732 621 ntBASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 AL137000.1-201ENST00000610528 1244 ntBASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 AC010998.3-201ENST00000613871 631 ntBASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 AC099654.15-201ENST00000639802 509 ntBASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 AC005224.3-201ENST00000584683 2140 ntBASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CCDC71LQ8N9Z2 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 PPBPP2-201ENST00000513150 1362 ntBASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 DLD-205ENST00000440410 1993 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 EI24P3-201ENST00000399046 1062 ntBASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 MYL6P5-201ENST00000412707 459 ntBASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 PPIAP10-201ENST00000438675 458 ntBASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 COL11A2P1-205ENST00000441798 676 ntBASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 OR52I1-201ENST00000450052 1050 ntBASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 AC108751.3-201ENST00000461814 1020 ntBASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 SNX18P24-201ENST00000505249 671 ntBASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 AC010409.2-201ENST00000505780 478 ntBASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 AC111000.6-201ENST00000514471 709 ntBASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 AC133552.4-201ENST00000576103 676 ntBASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 RNA5SP439-201ENST00000617595 124 ntBASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC71LQ8N9Z2 AC138627.1-204ENST00000641894 765 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 222.5 ms