Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 RN7SKP78-201ENST00000364711 318 ntBASIC9.22□□□□□ -0.93
VPS8Q8N3P4 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 AC126120.1-201ENST00000431082 470 ntBASIC9.22□□□□□ -0.93
VPS8Q8N3P4 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 NXT1P1-201ENST00000458481 316 ntBASIC9.22□□□□□ -0.93
VPS8Q8N3P4 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 TOMM22P4-201ENST00000511318 336 ntBASIC9.22□□□□□ -0.93
VPS8Q8N3P4 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 AC009237.12-201ENST00000604755 742 ntBASIC9.22□□□□□ -0.93
VPS8Q8N3P4 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VPS8Q8N3P4 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
VPS8Q8N3P4 AC106872.5-201ENST00000508856 1416 ntBASIC9.21□□□□□ -0.93
VPS8Q8N3P4 RPS2P45-201ENST00000469997 2057 ntBASIC9.21□□□□□ -0.93
VPS8Q8N3P4 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
VPS8Q8N3P4 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC9.21□□□□□ -0.93
VPS8Q8N3P4 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
VPS8Q8N3P4 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC9.21□□□□□ -0.94
VPS8Q8N3P4 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
VPS8Q8N3P4 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
VPS8Q8N3P4 NEPNP-201ENST00000404786 1371 ntBASIC9.21□□□□□ -0.94
VPS8Q8N3P4 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
VPS8Q8N3P4 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC9.21□□□□□ -0.94
VPS8Q8N3P4 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
VPS8Q8N3P4 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
VPS8Q8N3P4 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
VPS8Q8N3P4 HIST1H3PS1-201ENST00000404612 417 ntBASIC9.21□□□□□ -0.94
VPS8Q8N3P4 AC073410.1-201ENST00000435125 589 ntBASIC9.21□□□□□ -0.94
VPS8Q8N3P4 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC9.21□□□□□ -0.94
VPS8Q8N3P4 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
VPS8Q8N3P4 HMGN1P36-201ENST00000446623 298 ntBASIC9.21□□□□□ -0.94
VPS8Q8N3P4 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC9.21□□□□□ -0.94
VPS8Q8N3P4 RPSAP37-201ENST00000470913 821 ntBASIC9.21□□□□□ -0.94
VPS8Q8N3P4 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC9.21□□□□□ -0.94
VPS8Q8N3P4 UGT2A3P7-201ENST00000510485 734 ntBASIC9.21□□□□□ -0.94
VPS8Q8N3P4 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC9.21□□□□□ -0.94
VPS8Q8N3P4 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC9.21□□□□□ -0.94
VPS8Q8N3P4 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC9.21□□□□□ -0.94
VPS8Q8N3P4 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC9.21□□□□□ -0.94
VPS8Q8N3P4 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC9.21□□□□□ -0.94
VPS8Q8N3P4 AP003175.1-201ENST00000641383 6658 ntBASIC9.21□□□□□ -0.94
VPS8Q8N3P4 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
VPS8Q8N3P4 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
VPS8Q8N3P4 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.94
VPS8Q8N3P4 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS8Q8N3P4 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS8Q8N3P4 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS8Q8N3P4 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS8Q8N3P4 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS8Q8N3P4 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
VPS8Q8N3P4 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC9.2□□□□□ -0.94
VPS8Q8N3P4 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC9.2□□□□□ -0.94
VPS8Q8N3P4 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC9.2□□□□□ -0.94
VPS8Q8N3P4 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC9.2□□□□□ -0.94
VPS8Q8N3P4 AC073610.1-201ENST00000489971 396 ntBASIC9.2□□□□□ -0.94
VPS8Q8N3P4 AC027544.3-201ENST00000535082 757 ntBASIC9.2□□□□□ -0.94
VPS8Q8N3P4 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC9.2□□□□□ -0.94
VPS8Q8N3P4 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC9.2□□□□□ -0.94
VPS8Q8N3P4 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC9.2□□□□□ -0.94
VPS8Q8N3P4 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS8Q8N3P4 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS8Q8N3P4 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC9.2□□□□□ -0.94
VPS8Q8N3P4 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
VPS8Q8N3P4 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC9.2□□□□□ -0.94
VPS8Q8N3P4 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC9.2□□□□□ -0.94
VPS8Q8N3P4 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
VPS8Q8N3P4 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS8Q8N3P4 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS8Q8N3P4 AC005225.5-201ENST00000623547 2225 ntBASIC9.19□□□□□ -0.94
VPS8Q8N3P4 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS8Q8N3P4 AL161901.1-201ENST00000624954 3425 ntBASIC9.19□□□□□ -0.94
VPS8Q8N3P4 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
VPS8Q8N3P4 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
VPS8Q8N3P4 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS8Q8N3P4 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
VPS8Q8N3P4 RNF19BPY-201ENST00000458209 1550 ntBASIC9.19□□□□□ -0.94
VPS8Q8N3P4 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS8Q8N3P4 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS8Q8N3P4 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC9.19□□□□□ -0.94
VPS8Q8N3P4 FUNDC2P3-201ENST00000334716 533 ntBASIC9.19□□□□□ -0.94
VPS8Q8N3P4 RNU1-59P-201ENST00000364829 162 ntBASIC9.19□□□□□ -0.94
VPS8Q8N3P4 EEF1B2P8-201ENST00000414101 671 ntBASIC9.19□□□□□ -0.94
VPS8Q8N3P4 CHEK2P5-201ENST00000423877 246 ntBASIC9.19□□□□□ -0.94
VPS8Q8N3P4 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC9.19□□□□□ -0.94
VPS8Q8N3P4 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC9.19□□□□□ -0.94
VPS8Q8N3P4 AC096775.1-201ENST00000437724 448 ntBASIC9.19□□□□□ -0.94
VPS8Q8N3P4 AC009120.1-201ENST00000493458 473 ntBASIC9.19□□□□□ -0.94
VPS8Q8N3P4 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC9.19□□□□□ -0.94
VPS8Q8N3P4 AC012146.2-201ENST00000576545 416 ntBASIC9.19□□□□□ -0.94
VPS8Q8N3P4 U1.25-201ENST00000614085 162 ntBASIC9.19□□□□□ -0.94
VPS8Q8N3P4 U1.34-201ENST00000618578 162 ntBASIC9.19□□□□□ -0.94
VPS8Q8N3P4 U1.31-201ENST00000620022 160 ntBASIC9.19□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms