Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 LINC02495-203ENST00000636704 242 ntBASIC5.44□□□□□ -1.54
LRRC28Q86X40 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.44□□□□□ -1.54
LRRC28Q86X40 AC010325.3-201ENST00000641084 394 ntBASIC5.44□□□□□ -1.54
LRRC28Q86X40 AL596275.2-207ENST00000641188 675 ntBASIC5.44□□□□□ -1.54
LRRC28Q86X40 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
LRRC28Q86X40 AC024651.2-201ENST00000562480 2098 ntBASIC5.44□□□□□ -1.54
LRRC28Q86X40 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
LRRC28Q86X40 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
LRRC28Q86X40 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
LRRC28Q86X40 AC138907.8-201ENST00000623981 2256 ntBASIC5.44□□□□□ -1.54
LRRC28Q86X40 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
LRRC28Q86X40 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.44□□□□□ -1.54
LRRC28Q86X40 AL442128.2-201ENST00000620246 1824 ntBASIC5.44□□□□□ -1.54
LRRC28Q86X40 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LRRC28Q86X40 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
LRRC28Q86X40 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
LRRC28Q86X40 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LRRC28Q86X40 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LRRC28Q86X40 RPL31P11-201ENST00000426558 1558 ntBASIC5.43□□□□□ -1.54
LRRC28Q86X40 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
LRRC28Q86X40 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LRRC28Q86X40 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
LRRC28Q86X40 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.43□□□□□ -1.54
LRRC28Q86X40 MED28P4-201ENST00000433137 572 ntBASIC5.43□□□□□ -1.54
LRRC28Q86X40 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LRRC28Q86X40 AC097359.1-201ENST00000447946 463 ntBASIC5.43□□□□□ -1.54
LRRC28Q86X40 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.43□□□□□ -1.54
LRRC28Q86X40 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.43□□□□□ -1.54
LRRC28Q86X40 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.43□□□□□ -1.54
LRRC28Q86X40 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.43□□□□□ -1.54
LRRC28Q86X40 AC093816.1-201ENST00000515076 913 ntBASIC5.43□□□□□ -1.54
LRRC28Q86X40 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.43□□□□□ -1.54
LRRC28Q86X40 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LRRC28Q86X40 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.43□□□□□ -1.54
LRRC28Q86X40 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.43□□□□□ -1.54
LRRC28Q86X40 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.43□□□□□ -1.54
LRRC28Q86X40 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.43□□□□□ -1.54
LRRC28Q86X40 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.43□□□□□ -1.54
LRRC28Q86X40 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LRRC28Q86X40 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.43□□□□□ -1.54
LRRC28Q86X40 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LRRC28Q86X40 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
LRRC28Q86X40 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
LRRC28Q86X40 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.43□□□□□ -1.54
LRRC28Q86X40 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
LRRC28Q86X40 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.43□□□□□ -1.54
LRRC28Q86X40 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
LRRC28Q86X40 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
LRRC28Q86X40 AC090181.3-201ENST00000624777 1514 ntBASIC5.43□□□□□ -1.54
LRRC28Q86X40 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRRC28Q86X40 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRRC28Q86X40 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.42□□□□□ -1.54
LRRC28Q86X40 PPBPP2-201ENST00000513150 1362 ntBASIC5.42□□□□□ -1.54
LRRC28Q86X40 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRRC28Q86X40 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.42□□□□□ -1.54
LRRC28Q86X40 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRRC28Q86X40 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRRC28Q86X40 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
LRRC28Q86X40 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRRC28Q86X40 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LRRC28Q86X40 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LRRC28Q86X40 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
LRRC28Q86X40 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.42□□□□□ -1.54
LRRC28Q86X40 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
LRRC28Q86X40 YWHAZP4-201ENST00000392459 708 ntBASIC5.42□□□□□ -1.54
LRRC28Q86X40 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.42□□□□□ -1.54
LRRC28Q86X40 AC117434.1-201ENST00000419971 836 ntBASIC5.42□□□□□ -1.54
LRRC28Q86X40 GAPDHP75-201ENST00000433910 943 ntBASIC5.42□□□□□ -1.54
LRRC28Q86X40 AC010086.1-201ENST00000437359 1052 ntBASIC5.42□□□□□ -1.54
LRRC28Q86X40 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.42□□□□□ -1.54
LRRC28Q86X40 TIMM8BP2-201ENST00000445940 251 ntBASIC5.42□□□□□ -1.54
LRRC28Q86X40 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.42□□□□□ -1.54
LRRC28Q86X40 RN7SL39P-201ENST00000462264 297 ntBASIC5.42□□□□□ -1.54
LRRC28Q86X40 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LRRC28Q86X40 AC026782.2-201ENST00000510845 636 ntBASIC5.42□□□□□ -1.54
LRRC28Q86X40 snoU109.5-201ENST00000516231 132 ntBASIC5.42□□□□□ -1.54
LRRC28Q86X40 RN7SKP183-201ENST00000517169 324 ntBASIC5.42□□□□□ -1.54
LRRC28Q86X40 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.42□□□□□ -1.54
LRRC28Q86X40 CYCSP25-201ENST00000525280 316 ntBASIC5.42□□□□□ -1.54
LRRC28Q86X40 AL133399.1-201ENST00000527476 298 ntBASIC5.42□□□□□ -1.54
LRRC28Q86X40 AC244502.2-201ENST00000543361 851 ntBASIC5.42□□□□□ -1.54
LRRC28Q86X40 AC008055.1-201ENST00000547032 609 ntBASIC5.42□□□□□ -1.54
LRRC28Q86X40 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.42□□□□□ -1.54
LRRC28Q86X40 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC5.42□□□□□ -1.54
LRRC28Q86X40 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.42□□□□□ -1.54
LRRC28Q86X40 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.42□□□□□ -1.54
LRRC28Q86X40 MIR4433B-201ENST00000581329 102 ntBASIC5.42□□□□□ -1.54
LRRC28Q86X40 AL589863.1-201ENST00000595383 631 ntBASIC5.42□□□□□ -1.54
LRRC28Q86X40 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.42□□□□□ -1.54
LRRC28Q86X40 MIR6780B-201ENST00000610307 79 ntBASIC5.42□□□□□ -1.54
LRRC28Q86X40 AC006924.1-201ENST00000610750 559 ntBASIC5.42□□□□□ -1.54
LRRC28Q86X40 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.42□□□□□ -1.54
LRRC28Q86X40 AL122023.1-201ENST00000622847 530 ntBASIC5.42□□□□□ -1.54
LRRC28Q86X40 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.42□□□□□ -1.54
LRRC28Q86X40 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
LRRC28Q86X40 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
LRRC28Q86X40 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
LRRC28Q86X40 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
LRRC28Q86X40 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
LRRC28Q86X40 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms