Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 AP001000.1-201ENST00000526843 742 ntBASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 AC020978.7-201ENST00000575953 1187 ntBASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 AL163152.1-201ENST00000642001 374 ntBASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 XKRY2-202ENST00000623874 1581 ntBASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 XKRY-202ENST00000624960 1581 ntBASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
ZNF549Q6P9A3 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 AC114876.1-201ENST00000490962 1366 ntBASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 RNA5SP110-201ENST00000362638 115 ntBASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 RNA5SP375-201ENST00000362975 119 ntBASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 RNU1-59P-201ENST00000364829 162 ntBASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 PSMA6P1-201ENST00000400275 741 ntBASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 Z82198.3-201ENST00000421145 199 ntBASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 AL356121.1-201ENST00000442911 156 ntBASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 AC097359.1-201ENST00000447946 463 ntBASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 CEACAMP11-201ENST00000455211 583 ntBASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 AC106822.1-201ENST00000502647 526 ntBASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 SUMO2P19-201ENST00000518920 295 ntBASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 MTND1P6-201ENST00000523621 946 ntBASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 MIR132-201ENST00000591554 101 ntBASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 AC005229.3-201ENST00000603438 323 ntBASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 AC034229.4-201ENST00000607861 441 ntBASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 AP005131.7-201ENST00000610087 611 ntBASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 U1.25-201ENST00000614085 162 ntBASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 HTR1DP1-201ENST00000616500 888 ntBASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 U1.34-201ENST00000618578 162 ntBASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 U1.31-201ENST00000620022 160 ntBASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 AP003072.5-201ENST00000623872 773 ntBASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 AC010325.3-201ENST00000641084 394 ntBASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 AC007159.1-201ENST00000566529 4706 ntBASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 ZNF101P1-201ENST00000435701 1720 ntBASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ZNF549Q6P9A3 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 AC018765.1-201ENST00000623357 3446 ntBASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
ZNF549Q6P9A3 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms