Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 RNA5SP211-201ENST00000365516 117 ntBASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 RPL6P21-201ENST00000418672 846 ntBASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 NPM1P25-201ENST00000429734 854 ntBASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 CUBNP2-201ENST00000443534 1139 ntBASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 AC083795.1-201ENST00000491760 320 ntBASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 PRMT5P1-201ENST00000514351 598 ntBASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 RN7SKP238-201ENST00000516483 249 ntBASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 AC110056.1-201ENST00000525759 911 ntBASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 AC006512.2-201ENST00000543250 486 ntBASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 AP001437.1-201ENST00000608783 456 ntBASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 AL136228.1-201ENST00000622221 319 ntBASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 MAPK10-261ENST00000641050 3109 ntBASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 AP000547.3-204ENST00000588548 2523 ntBASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.31□□□□□ -1.4
PTPN20Q4JDL3 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 SNORA70.9-201ENST00000384370 135 ntBASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 SNRPEP6-201ENST00000407465 277 ntBASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 RPS26P38-201ENST00000414476 348 ntBASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 GAPDHP75-201ENST00000433910 943 ntBASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 H3F3BP1-201ENST00000440551 403 ntBASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 RPS7P3-201ENST00000443360 580 ntBASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 LDHAP1-201ENST00000509421 992 ntBASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 TOMM22P4-201ENST00000511318 336 ntBASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 AC026826.3-201ENST00000561747 158 ntBASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 MIR6809-201ENST00000612189 116 ntBASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 AL355974.3-201ENST00000617383 467 ntBASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 AC096708.4-201ENST00000620563 552 ntBASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 RBPJP7-201ENST00000442803 1447 ntBASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 RBPJP5-201ENST00000449433 1447 ntBASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 AL161756.3-201ENST00000641216 2071 ntBASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 IMMTP1-201ENST00000435590 2219 ntBASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 THAP12P9-201ENST00000503971 2360 ntBASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 AL022323.4-201ENST00000623980 13120 ntBASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
PTPN20Q4JDL3 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.29□□□□□ -1.4
PTPN20Q4JDL3 AC073365.1-203ENST00000641055 1992 ntBASIC6.29□□□□□ -1.4
PTPN20Q4JDL3 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PTPN20Q4JDL3 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PTPN20Q4JDL3 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PTPN20Q4JDL3 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
PTPN20Q4JDL3 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.29□□□□□ -1.4
PTPN20Q4JDL3 AC130304.1-201ENST00000622942 2385 ntBASIC6.29□□□□□ -1.4
PTPN20Q4JDL3 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
PTPN20Q4JDL3 RN7SKP77-201ENST00000363261 353 ntBASIC6.29□□□□□ -1.4
PTPN20Q4JDL3 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
PTPN20Q4JDL3 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms