Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AP001496.3-201ENST00000580230 913 ntBASIC5.99□□□□□ -1.45
RAE1P78406 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.99□□□□□ -1.45
RAE1P78406 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.99□□□□□ -1.45
RAE1P78406 NPIPB1P-202ENST00000588786 828 ntBASIC5.99□□□□□ -1.45
RAE1P78406 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.99□□□□□ -1.45
RAE1P78406 AC012065.3-201ENST00000602736 439 ntBASIC5.99□□□□□ -1.45
RAE1P78406 HMGB1P51-201ENST00000605166 638 ntBASIC5.99□□□□□ -1.45
RAE1P78406 AC018754.1-201ENST00000607486 925 ntBASIC5.99□□□□□ -1.45
RAE1P78406 OR51C1P-201ENST00000608504 942 ntBASIC5.99□□□□□ -1.45
RAE1P78406 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.99□□□□□ -1.45
RAE1P78406 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.99□□□□□ -1.45
RAE1P78406 MIR6885-201ENST00000612241 66 ntBASIC5.99□□□□□ -1.45
RAE1P78406 CR589904.2-201ENST00000612533 440 ntBASIC5.99□□□□□ -1.45
RAE1P78406 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.99□□□□□ -1.45
RAE1P78406 OR7E91P-202ENST00000642062 1198 ntBASIC5.99□□□□□ -1.45
RAE1P78406 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
RAE1P78406 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.99□□□□□ -1.45
RAE1P78406 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
RAE1P78406 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RAE1P78406 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RAE1P78406 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.99□□□□□ -1.45
RAE1P78406 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
RAE1P78406 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC5.99□□□□□ -1.45
RAE1P78406 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RAE1P78406 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
RAE1P78406 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC5.99□□□□□ -1.45
RAE1P78406 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
RAE1P78406 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RAE1P78406 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RAE1P78406 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.99□□□□□ -1.45
RAE1P78406 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.99□□□□□ -1.45
RAE1P78406 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RAE1P78406 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.98□□□□□ -1.45
RAE1P78406 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RAE1P78406 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RAE1P78406 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RAE1P78406 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC5.98□□□□□ -1.45
RAE1P78406 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.98□□□□□ -1.45
RAE1P78406 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RAE1P78406 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
RAE1P78406 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RAE1P78406 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
RAE1P78406 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RAE1P78406 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.98□□□□□ -1.45
RAE1P78406 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.98□□□□□ -1.45
RAE1P78406 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
RAE1P78406 HMGA1P8-201ENST00000414130 321 ntBASIC5.98□□□□□ -1.45
RAE1P78406 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.98□□□□□ -1.45
RAE1P78406 ARMC4P1-201ENST00000438905 707 ntBASIC5.98□□□□□ -1.45
RAE1P78406 AL513321.1-201ENST00000441175 761 ntBASIC5.98□□□□□ -1.45
RAE1P78406 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.98□□□□□ -1.45
RAE1P78406 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.98□□□□□ -1.45
RAE1P78406 RARRES2P3-201ENST00000457739 473 ntBASIC5.98□□□□□ -1.45
RAE1P78406 AC022336.1-201ENST00000475510 337 ntBASIC5.98□□□□□ -1.45
RAE1P78406 MARK2P8-201ENST00000476069 952 ntBASIC5.98□□□□□ -1.45
RAE1P78406 AC108729.2-201ENST00000476543 840 ntBASIC5.98□□□□□ -1.45
RAE1P78406 RN7SL369P-201ENST00000477138 299 ntBASIC5.98□□□□□ -1.45
RAE1P78406 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.98□□□□□ -1.45
RAE1P78406 GM2AP2-201ENST00000491764 562 ntBASIC5.98□□□□□ -1.45
RAE1P78406 EIF4E2P2-201ENST00000492033 736 ntBASIC5.98□□□□□ -1.45
RAE1P78406 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.98□□□□□ -1.45
RAE1P78406 AC010343.2-201ENST00000510162 224 ntBASIC5.98□□□□□ -1.45
RAE1P78406 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RAE1P78406 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.98□□□□□ -1.45
RAE1P78406 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.98□□□□□ -1.45
RAE1P78406 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.98□□□□□ -1.45
RAE1P78406 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.98□□□□□ -1.45
RAE1P78406 AC026898.1-201ENST00000586404 571 ntBASIC5.98□□□□□ -1.45
RAE1P78406 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.98□□□□□ -1.45
RAE1P78406 AL589765.6-201ENST00000601909 549 ntBASIC5.98□□□□□ -1.45
RAE1P78406 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.98□□□□□ -1.45
RAE1P78406 AC139792.1-201ENST00000607051 647 ntBASIC5.98□□□□□ -1.45
RAE1P78406 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.98□□□□□ -1.45
RAE1P78406 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.98□□□□□ -1.45
RAE1P78406 AC079298.2-201ENST00000623885 459 ntBASIC5.98□□□□□ -1.45
RAE1P78406 TEX41-279ENST00000629149 609 ntTSL 5 BASIC5.98□□□□□ -1.45
RAE1P78406 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.98□□□□□ -1.45
RAE1P78406 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.98□□□□□ -1.45
RAE1P78406 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RAE1P78406 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
RAE1P78406 CASC19-261ENST00000641853 1638 ntBASIC5.98□□□□□ -1.45
RAE1P78406 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RAE1P78406 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC5.98□□□□□ -1.45
RAE1P78406 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
RAE1P78406 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RAE1P78406 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.98□□□□□ -1.45
RAE1P78406 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RAE1P78406 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC5.98□□□□□ -1.45
RAE1P78406 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RAE1P78406 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RAE1P78406 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RAE1P78406 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
RAE1P78406 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
RAE1P78406 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.97□□□□□ -1.45
RAE1P78406 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RAE1P78406 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RAE1P78406 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.97□□□□□ -1.45
RAE1P78406 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RAE1P78406 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RAE1P78406 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms