Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC7□□□□□ -1.29
CCNA1P78396 SHQ1P1-201ENST00000437111 1544 ntBASIC7□□□□□ -1.29
CCNA1P78396 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
CCNA1P78396 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
CCNA1P78396 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7□□□□□ -1.29
CCNA1P78396 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7□□□□□ -1.29
CCNA1P78396 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7□□□□□ -1.29
CCNA1P78396 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7□□□□□ -1.29
CCNA1P78396 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.99□□□□□ -1.29
CCNA1P78396 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CCNA1P78396 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CCNA1P78396 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CCNA1P78396 AC092725.2-201ENST00000567658 1389 ntBASIC6.99□□□□□ -1.29
CCNA1P78396 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.99□□□□□ -1.29
CCNA1P78396 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.99□□□□□ -1.29
CCNA1P78396 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CCNA1P78396 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.99□□□□□ -1.29
CCNA1P78396 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
CCNA1P78396 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
CCNA1P78396 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.99□□□□□ -1.29
CCNA1P78396 RPL34P3-201ENST00000421454 338 ntBASIC6.99□□□□□ -1.29
CCNA1P78396 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.99□□□□□ -1.29
CCNA1P78396 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.99□□□□□ -1.29
CCNA1P78396 MYO5BP2-201ENST00000449815 1277 ntBASIC6.99□□□□□ -1.29
CCNA1P78396 AC016027.4-201ENST00000450866 277 ntBASIC6.99□□□□□ -1.29
CCNA1P78396 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.99□□□□□ -1.29
CCNA1P78396 AC110749.1-201ENST00000462007 357 ntBASIC6.99□□□□□ -1.29
CCNA1P78396 AC026348.1-201ENST00000462549 1053 ntBASIC6.99□□□□□ -1.29
CCNA1P78396 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
CCNA1P78396 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.99□□□□□ -1.29
CCNA1P78396 AC083795.1-201ENST00000491760 320 ntBASIC6.99□□□□□ -1.29
CCNA1P78396 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.99□□□□□ -1.29
CCNA1P78396 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
CCNA1P78396 ATP5LP3-201ENST00000514223 304 ntBASIC6.99□□□□□ -1.29
CCNA1P78396 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CCNA1P78396 SNORA70.20-201ENST00000516848 126 ntBASIC6.99□□□□□ -1.29
CCNA1P78396 OR56A7P-201ENST00000524865 941 ntBASIC6.99□□□□□ -1.29
CCNA1P78396 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.99□□□□□ -1.29
CCNA1P78396 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.99□□□□□ -1.29
CCNA1P78396 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.99□□□□□ -1.29
CCNA1P78396 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.99□□□□□ -1.29
CCNA1P78396 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.99□□□□□ -1.29
CCNA1P78396 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
CCNA1P78396 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.99□□□□□ -1.29
CCNA1P78396 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.99□□□□□ -1.29
CCNA1P78396 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CCNA1P78396 AL357562.1-201ENST00000624911 609 ntBASIC6.99□□□□□ -1.29
CCNA1P78396 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.99□□□□□ -1.29
CCNA1P78396 AC116667.2-201ENST00000641075 823 ntBASIC6.99□□□□□ -1.29
CCNA1P78396 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.99□□□□□ -1.29
CCNA1P78396 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CCNA1P78396 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.99□□□□□ -1.29
CCNA1P78396 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CCNA1P78396 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.99□□□□□ -1.29
CCNA1P78396 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CCNA1P78396 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
CCNA1P78396 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CCNA1P78396 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
CCNA1P78396 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CCNA1P78396 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CCNA1P78396 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
CCNA1P78396 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CCNA1P78396 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
CCNA1P78396 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
CCNA1P78396 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.98□□□□□ -1.29
CCNA1P78396 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.98□□□□□ -1.29
CCNA1P78396 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.98□□□□□ -1.29
CCNA1P78396 RNU105B-201ENST00000364478 208 ntBASIC6.98□□□□□ -1.29
CCNA1P78396 RNU6-316P-201ENST00000391027 107 ntBASIC6.98□□□□□ -1.29
CCNA1P78396 RPS21P8-201ENST00000413365 247 ntBASIC6.98□□□□□ -1.29
CCNA1P78396 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.98□□□□□ -1.29
CCNA1P78396 AC023245.1-201ENST00000468501 517 ntBASIC6.98□□□□□ -1.29
CCNA1P78396 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.98□□□□□ -1.29
CCNA1P78396 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC6.98□□□□□ -1.29
CCNA1P78396 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.98□□□□□ -1.29
CCNA1P78396 AL121579.2-201ENST00000555466 590 ntBASIC6.98□□□□□ -1.29
CCNA1P78396 AC051619.2-201ENST00000559063 397 ntBASIC6.98□□□□□ -1.29
CCNA1P78396 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.98□□□□□ -1.29
CCNA1P78396 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.98□□□□□ -1.29
CCNA1P78396 AC010547.6-201ENST00000571789 193 ntBASIC6.98□□□□□ -1.29
CCNA1P78396 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCNA1P78396 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCNA1P78396 AC141002.1-201ENST00000607025 279 ntBASIC6.98□□□□□ -1.29
CCNA1P78396 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.98□□□□□ -1.29
CCNA1P78396 AC020763.5-201ENST00000623298 430 ntBASIC6.98□□□□□ -1.29
CCNA1P78396 OR7A1P-202ENST00000641542 1158 ntBASIC6.98□□□□□ -1.29
CCNA1P78396 AC092821.3-202ENST00000641304 2767 ntBASIC6.98□□□□□ -1.29
CCNA1P78396 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.98□□□□□ -1.29
CCNA1P78396 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CCNA1P78396 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCNA1P78396 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.98□□□□□ -1.29
CCNA1P78396 AL033543.1-201ENST00000623440 13454 ntBASIC6.98□□□□□ -1.29
CCNA1P78396 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CCNA1P78396 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CCNA1P78396 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CCNA1P78396 AL449283.1-201ENST00000602631 3403 ntBASIC6.98□□□□□ -1.29
CCNA1P78396 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CCNA1P78396 AP002370.1-201ENST00000528055 1602 ntBASIC6.98□□□□□ -1.29
CCNA1P78396 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CCNA1P78396 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms