Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
LMO4P61968 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
LMO4P61968 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LMO4P61968 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.04□□□□□ -1.6
LMO4P61968 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
LMO4P61968 AC110373.1-201ENST00000505994 3505 ntBASIC5.03□□□□□ -1.6
LMO4P61968 AC005618.1-201ENST00000606901 3148 ntBASIC5.03□□□□□ -1.6
LMO4P61968 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LMO4P61968 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LMO4P61968 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LMO4P61968 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.03□□□□□ -1.6
LMO4P61968 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
LMO4P61968 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.03□□□□□ -1.6
LMO4P61968 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LMO4P61968 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LMO4P61968 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
LMO4P61968 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LMO4P61968 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LMO4P61968 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LMO4P61968 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC5.03□□□□□ -1.6
LMO4P61968 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
LMO4P61968 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
LMO4P61968 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
LMO4P61968 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.03□□□□□ -1.6
LMO4P61968 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LMO4P61968 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.03□□□□□ -1.6
LMO4P61968 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LMO4P61968 RNU1-150P-201ENST00000362491 162 ntBASIC5.03□□□□□ -1.6
LMO4P61968 RN7SKP69-201ENST00000365390 305 ntBASIC5.03□□□□□ -1.6
LMO4P61968 SNORA17A-201ENST00000391185 133 ntBASIC5.03□□□□□ -1.6
LMO4P61968 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.03□□□□□ -1.6
LMO4P61968 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
LMO4P61968 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC5.03□□□□□ -1.6
LMO4P61968 AL354890.1-201ENST00000413730 346 ntBASIC5.03□□□□□ -1.6
LMO4P61968 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LMO4P61968 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.03□□□□□ -1.6
LMO4P61968 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.03□□□□□ -1.6
LMO4P61968 PCBP2P1-201ENST00000437262 977 ntBASIC5.03□□□□□ -1.6
LMO4P61968 TUBB4BP6-201ENST00000437576 479 ntBASIC5.03□□□□□ -1.6
LMO4P61968 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.03□□□□□ -1.6
LMO4P61968 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.03□□□□□ -1.6
LMO4P61968 AP006222.1-205ENST00000450734 457 ntBASIC5.03□□□□□ -1.6
LMO4P61968 AC016027.4-201ENST00000450866 277 ntBASIC5.03□□□□□ -1.6
LMO4P61968 RPS27AP3-201ENST00000453803 454 ntBASIC5.03□□□□□ -1.6
LMO4P61968 GEMIN2P1-201ENST00000454246 752 ntBASIC5.03□□□□□ -1.6
LMO4P61968 NXT1P1-201ENST00000458481 316 ntBASIC5.03□□□□□ -1.6
LMO4P61968 AC018638.3-201ENST00000461273 132 ntBASIC5.03□□□□□ -1.6
LMO4P61968 RN7SL269P-201ENST00000467795 305 ntBASIC5.03□□□□□ -1.6
LMO4P61968 AL122020.1-201ENST00000472287 459 ntBASIC5.03□□□□□ -1.6
LMO4P61968 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.03□□□□□ -1.6
LMO4P61968 AC114728.1-201ENST00000488289 483 ntBASIC5.03□□□□□ -1.6
LMO4P61968 RN7SL101P-201ENST00000496350 279 ntBASIC5.03□□□□□ -1.6
LMO4P61968 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.03□□□□□ -1.6
LMO4P61968 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.03□□□□□ -1.6
LMO4P61968 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.03□□□□□ -1.6
LMO4P61968 AC110056.1-201ENST00000525759 911 ntBASIC5.03□□□□□ -1.6
LMO4P61968 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.03□□□□□ -1.6
LMO4P61968 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
LMO4P61968 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.03□□□□□ -1.6
LMO4P61968 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.03□□□□□ -1.6
LMO4P61968 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.03□□□□□ -1.6
LMO4P61968 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.03□□□□□ -1.6
LMO4P61968 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LMO4P61968 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.03□□□□□ -1.6
LMO4P61968 AC122134.1-202ENST00000569111 1201 ntBASIC5.03□□□□□ -1.6
LMO4P61968 AC115989.2-201ENST00000578640 563 ntBASIC5.03□□□□□ -1.6
LMO4P61968 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
LMO4P61968 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.03□□□□□ -1.6
LMO4P61968 AL162574.2-201ENST00000614618 657 ntBASIC5.03□□□□□ -1.6
LMO4P61968 TCL6_3.1-201ENST00000619064 137 ntBASIC5.03□□□□□ -1.6
LMO4P61968 AC127024.6-201ENST00000621598 424 ntBASIC5.03□□□□□ -1.6
LMO4P61968 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.03□□□□□ -1.6
LMO4P61968 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.03□□□□□ -1.6
LMO4P61968 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.03□□□□□ -1.6
LMO4P61968 SNORA17.5-201ENST00000630429 132 ntBASIC5.03□□□□□ -1.6
LMO4P61968 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LMO4P61968 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LMO4P61968 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LMO4P61968 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
LMO4P61968 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
LMO4P61968 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
LMO4P61968 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LMO4P61968 AC012254.3-201ENST00000591183 2117 ntBASIC5.03□□□□□ -1.6
LMO4P61968 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LMO4P61968 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
LMO4P61968 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.03□□□□□ -1.6
LMO4P61968 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.03□□□□□ -1.6
LMO4P61968 AC011369.2-201ENST00000624423 1567 ntBASIC5.03□□□□□ -1.6
LMO4P61968 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
LMO4P61968 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.03□□□□□ -1.6
LMO4P61968 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
LMO4P61968 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
LMO4P61968 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
LMO4P61968 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LMO4P61968 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
LMO4P61968 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LMO4P61968 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LMO4P61968 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LMO4P61968 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.02□□□□□ -1.61
LMO4P61968 AC011815.2-201ENST00000618230 2021 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms