Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
AP3S2P59780 MUC2-202ENST00000613187 4845 ntBASIC5.14□□□□□ -1.59
AP3S2P59780 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
AP3S2P59780 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
AP3S2P59780 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC5.14□□□□□ -1.59
AP3S2P59780 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.14□□□□□ -1.59
AP3S2P59780 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
AP3S2P59780 AC130304.1-201ENST00000622942 2385 ntBASIC5.14□□□□□ -1.59
AP3S2P59780 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
AP3S2P59780 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
AP3S2P59780 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
AP3S2P59780 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
AP3S2P59780 AC079248.1-201ENST00000427568 1546 ntBASIC5.14□□□□□ -1.59
AP3S2P59780 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
AP3S2P59780 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.14□□□□□ -1.59
AP3S2P59780 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
AP3S2P59780 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
AP3S2P59780 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
AP3S2P59780 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
AP3S2P59780 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
AP3S2P59780 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
AP3S2P59780 RN7SKP145-201ENST00000363291 303 ntBASIC5.14□□□□□ -1.59
AP3S2P59780 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC5.14□□□□□ -1.59
AP3S2P59780 RPL23AP7-201ENST00000391616 738 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
AP3S2P59780 AC109638.1-201ENST00000417406 326 ntBASIC5.14□□□□□ -1.59
AP3S2P59780 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
AP3S2P59780 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.14□□□□□ -1.59
AP3S2P59780 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC5.14□□□□□ -1.59
AP3S2P59780 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.14□□□□□ -1.59
AP3S2P59780 OR52I1-201ENST00000450052 1050 ntBASIC5.14□□□□□ -1.59
AP3S2P59780 AC005517.1-201ENST00000452091 489 ntBASIC5.14□□□□□ -1.59
AP3S2P59780 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.14□□□□□ -1.59
AP3S2P59780 RPL12P39-201ENST00000455456 496 ntBASIC5.14□□□□□ -1.59
AP3S2P59780 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.14□□□□□ -1.59
AP3S2P59780 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.14□□□□□ -1.59
AP3S2P59780 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.14□□□□□ -1.59
AP3S2P59780 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.14□□□□□ -1.59
AP3S2P59780 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.14□□□□□ -1.59
AP3S2P59780 AC093878.1-201ENST00000515630 432 ntBASIC5.14□□□□□ -1.59
AP3S2P59780 AC021733.2-201ENST00000518830 497 ntBASIC5.14□□□□□ -1.59
AP3S2P59780 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.14□□□□□ -1.59
AP3S2P59780 REG4-204ENST00000530654 612 ntTSL 5 BASIC5.14□□□□□ -1.59
AP3S2P59780 OR4C1P-201ENST00000530880 937 ntBASIC5.14□□□□□ -1.59
AP3S2P59780 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.14□□□□□ -1.59
AP3S2P59780 PDCL3P1-201ENST00000534575 734 ntBASIC5.14□□□□□ -1.59
AP3S2P59780 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.14□□□□□ -1.59
AP3S2P59780 RPL3P13-201ENST00000550415 216 ntBASIC5.14□□□□□ -1.59
AP3S2P59780 AC126615.2-201ENST00000553003 515 ntBASIC5.14□□□□□ -1.59
AP3S2P59780 RNU4ATAC-201ENST00000580972 127 ntBASIC5.14□□□□□ -1.59
AP3S2P59780 SYPL1P2-201ENST00000582878 727 ntBASIC5.14□□□□□ -1.59
AP3S2P59780 NDUFA3P1-201ENST00000588007 252 ntBASIC5.14□□□□□ -1.59
AP3S2P59780 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.14□□□□□ -1.59
AP3S2P59780 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC5.14□□□□□ -1.59
AP3S2P59780 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.14□□□□□ -1.59
AP3S2P59780 AL034374.2-201ENST00000605281 548 ntBASIC5.14□□□□□ -1.59
AP3S2P59780 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.14□□□□□ -1.59
AP3S2P59780 RN7SL261P-201ENST00000613441 282 ntBASIC5.14□□□□□ -1.59
AP3S2P59780 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
AP3S2P59780 AC007347.2-201ENST00000623044 180 ntBASIC5.14□□□□□ -1.59
AP3S2P59780 AC138965.3-201ENST00000623875 498 ntBASIC5.14□□□□□ -1.59
AP3S2P59780 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC5.14□□□□□ -1.59
AP3S2P59780 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC5.14□□□□□ -1.59
AP3S2P59780 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.14□□□□□ -1.59
AP3S2P59780 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
AP3S2P59780 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
AP3S2P59780 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
AP3S2P59780 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
AP3S2P59780 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
AP3S2P59780 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.14□□□□□ -1.59
AP3S2P59780 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
AP3S2P59780 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
AP3S2P59780 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.14□□□□□ -1.59
AP3S2P59780 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
AP3S2P59780 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
AP3S2P59780 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
AP3S2P59780 MTCO1P46-201ENST00000451639 1491 ntBASIC5.13□□□□□ -1.59
AP3S2P59780 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.13□□□□□ -1.59
AP3S2P59780 MAPK10-338ENST00000641647 3362 ntBASIC5.13□□□□□ -1.59
AP3S2P59780 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
AP3S2P59780 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.13□□□□□ -1.59
AP3S2P59780 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
AP3S2P59780 MTHFD2P5-201ENST00000320415 844 ntBASIC5.13□□□□□ -1.59
AP3S2P59780 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
AP3S2P59780 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
AP3S2P59780 RNA5SP152-201ENST00000365184 110 ntBASIC5.13□□□□□ -1.59
AP3S2P59780 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
AP3S2P59780 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.13□□□□□ -1.59
AP3S2P59780 U3.52-201ENST00000384034 216 ntBASIC5.13□□□□□ -1.59
AP3S2P59780 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
AP3S2P59780 RN7SKP137-201ENST00000411074 307 ntBASIC5.13□□□□□ -1.59
AP3S2P59780 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.13□□□□□ -1.59
AP3S2P59780 AC242426.1-201ENST00000435270 960 ntBASIC5.13□□□□□ -1.59
AP3S2P59780 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.13□□□□□ -1.59
AP3S2P59780 SNX18P9-201ENST00000440580 835 ntBASIC5.13□□□□□ -1.59
AP3S2P59780 AC145625.1-201ENST00000441444 592 ntTSL 4 BASIC5.13□□□□□ -1.59
AP3S2P59780 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC5.13□□□□□ -1.59
AP3S2P59780 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.13□□□□□ -1.59
AP3S2P59780 RN7SKP198-201ENST00000459286 306 ntBASIC5.13□□□□□ -1.59
AP3S2P59780 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC5.13□□□□□ -1.59
AP3S2P59780 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms