Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.72□□□□□ -1.33
VCPP55072 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
VCPP55072 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.71□□□□□ -1.33
VCPP55072 AL662795.2-201ENST00000624252 3706 ntBASIC6.71□□□□□ -1.33
VCPP55072 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
VCPP55072 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
VCPP55072 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
VCPP55072 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.71□□□□□ -1.34
VCPP55072 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
VCPP55072 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
VCPP55072 AC123769.1-201ENST00000530992 3192 ntBASIC6.71□□□□□ -1.34
VCPP55072 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
VCPP55072 SNORD8-201ENST00000363915 110 ntBASIC6.71□□□□□ -1.34
VCPP55072 MIR130B-202ENST00000385018 82 ntBASIC6.71□□□□□ -1.34
VCPP55072 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.71□□□□□ -1.34
VCPP55072 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.71□□□□□ -1.34
VCPP55072 AC007394.1-201ENST00000421941 531 ntBASIC6.71□□□□□ -1.34
VCPP55072 NIPA2P1-201ENST00000426223 976 ntBASIC6.71□□□□□ -1.34
VCPP55072 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
VCPP55072 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.71□□□□□ -1.34
VCPP55072 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
VCPP55072 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.71□□□□□ -1.34
VCPP55072 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.71□□□□□ -1.34
VCPP55072 AC002075.1-201ENST00000457396 676 ntBASIC6.71□□□□□ -1.34
VCPP55072 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.71□□□□□ -1.34
VCPP55072 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
VCPP55072 OR5H7P-201ENST00000514084 930 ntBASIC6.71□□□□□ -1.34
VCPP55072 RNA5SP340-201ENST00000517132 107 ntBASIC6.71□□□□□ -1.34
VCPP55072 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.71□□□□□ -1.34
VCPP55072 AC090651.1-201ENST00000567865 634 ntBASIC6.71□□□□□ -1.34
VCPP55072 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.71□□□□□ -1.34
VCPP55072 AC211433.2-201ENST00000608433 387 ntBASIC6.71□□□□□ -1.34
VCPP55072 AC004477.3-201ENST00000614061 590 ntBASIC6.71□□□□□ -1.34
VCPP55072 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
VCPP55072 AL157762.1-201ENST00000619612 415 ntBASIC6.71□□□□□ -1.34
VCPP55072 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.71□□□□□ -1.34
VCPP55072 AL132640.3-201ENST00000630473 177 ntBASIC6.71□□□□□ -1.34
VCPP55072 LINC02495-203ENST00000636704 242 ntBASIC6.71□□□□□ -1.34
VCPP55072 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
VCPP55072 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
VCPP55072 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
VCPP55072 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
VCPP55072 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
VCPP55072 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
VCPP55072 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
VCPP55072 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
VCPP55072 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
VCPP55072 AC011815.2-201ENST00000618230 2021 ntBASIC6.71□□□□□ -1.34
VCPP55072 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.71□□□□□ -1.34
VCPP55072 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.7□□□□□ -1.34
VCPP55072 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
VCPP55072 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.7□□□□□ -1.34
VCPP55072 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VCPP55072 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VCPP55072 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
VCPP55072 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
VCPP55072 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VCPP55072 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
VCPP55072 AC136624.1-201ENST00000400791 413 ntBASIC6.7□□□□□ -1.34
VCPP55072 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
VCPP55072 RN7SKP216-201ENST00000411050 312 ntBASIC6.7□□□□□ -1.34
VCPP55072 DHFRP2-201ENST00000414224 547 ntBASIC6.7□□□□□ -1.34
VCPP55072 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.7□□□□□ -1.34
VCPP55072 ATP5LP2-201ENST00000440646 311 ntBASIC6.7□□□□□ -1.34
VCPP55072 SNX18P26-201ENST00000458433 740 ntBASIC6.7□□□□□ -1.34
VCPP55072 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC6.7□□□□□ -1.34
VCPP55072 SUMO2P19-201ENST00000518920 295 ntBASIC6.7□□□□□ -1.34
VCPP55072 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.7□□□□□ -1.34
VCPP55072 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.7□□□□□ -1.34
VCPP55072 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VCPP55072 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.7□□□□□ -1.34
VCPP55072 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.7□□□□□ -1.34
VCPP55072 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.7□□□□□ -1.34
VCPP55072 AC007346.1-201ENST00000569208 867 ntBASIC6.7□□□□□ -1.34
VCPP55072 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.7□□□□□ -1.34
VCPP55072 RN7SL475P-201ENST00000583379 298 ntBASIC6.7□□□□□ -1.34
VCPP55072 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.7□□□□□ -1.34
VCPP55072 AL080312.2-201ENST00000613001 630 ntBASIC6.7□□□□□ -1.34
VCPP55072 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.7□□□□□ -1.34
VCPP55072 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.7□□□□□ -1.34
VCPP55072 LINC01616-201ENST00000561816 2280 ntBASIC6.7□□□□□ -1.34
VCPP55072 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VCPP55072 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
VCPP55072 AC006600.2-201ENST00000624834 2506 ntBASIC6.7□□□□□ -1.34
VCPP55072 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
VCPP55072 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
VCPP55072 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.69□□□□□ -1.34
VCPP55072 RPL31P11-201ENST00000426558 1558 ntBASIC6.69□□□□□ -1.34
VCPP55072 AC011369.2-201ENST00000624423 1567 ntBASIC6.69□□□□□ -1.34
VCPP55072 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.69□□□□□ -1.34
VCPP55072 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
VCPP55072 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.69□□□□□ -1.34
VCPP55072 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
VCPP55072 AC027575.3-201ENST00000583058 2747 ntBASIC6.69□□□□□ -1.34
VCPP55072 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
VCPP55072 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.69□□□□□ -1.34
VCPP55072 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.69□□□□□ -1.34
VCPP55072 AL157702.1-201ENST00000398764 426 ntBASIC6.69□□□□□ -1.34
VCPP55072 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC6.69□□□□□ -1.34
VCPP55072 RN7SKP281-201ENST00000410472 352 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms