Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.95□□□□□ -1.3
HMGCS2P54868 AC003992.1-201ENST00000635364 557 ntBASIC6.95□□□□□ -1.3
HMGCS2P54868 RPS2P45-201ENST00000469997 2057 ntBASIC6.95□□□□□ -1.3
HMGCS2P54868 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC6.95□□□□□ -1.3
HMGCS2P54868 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
HMGCS2P54868 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.95□□□□□ -1.3
HMGCS2P54868 AC096921.2-201ENST00000561507 1916 ntBASIC6.95□□□□□ -1.3
HMGCS2P54868 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HMGCS2P54868 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.95□□□□□ -1.3
HMGCS2P54868 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HMGCS2P54868 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
HMGCS2P54868 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.95□□□□□ -1.3
HMGCS2P54868 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.95□□□□□ -1.3
HMGCS2P54868 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HMGCS2P54868 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
HMGCS2P54868 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.95□□□□□ -1.3
HMGCS2P54868 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGCS2P54868 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGCS2P54868 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.94□□□□□ -1.3
HMGCS2P54868 AP002833.3-201ENST00000625075 2265 ntBASIC6.94□□□□□ -1.3
HMGCS2P54868 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
HMGCS2P54868 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
HMGCS2P54868 MAPK10-323ENST00000641493 3207 ntBASIC6.94□□□□□ -1.3
HMGCS2P54868 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGCS2P54868 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
HMGCS2P54868 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.94□□□□□ -1.3
HMGCS2P54868 Z83820.1-201ENST00000456978 1499 ntBASIC6.94□□□□□ -1.3
HMGCS2P54868 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGCS2P54868 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGCS2P54868 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGCS2P54868 RNA5SP46-201ENST00000362370 120 ntBASIC6.94□□□□□ -1.3
HMGCS2P54868 RNA5SP132-201ENST00000364725 118 ntBASIC6.94□□□□□ -1.3
HMGCS2P54868 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.94□□□□□ -1.3
HMGCS2P54868 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.94□□□□□ -1.3
HMGCS2P54868 AC068138.1-201ENST00000412635 217 ntBASIC6.94□□□□□ -1.3
HMGCS2P54868 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.94□□□□□ -1.3
HMGCS2P54868 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.94□□□□□ -1.3
HMGCS2P54868 AL662874.1-201ENST00000426065 230 ntBASIC6.94□□□□□ -1.3
HMGCS2P54868 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.94□□□□□ -1.3
HMGCS2P54868 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.94□□□□□ -1.3
HMGCS2P54868 AL445928.1-201ENST00000435545 222 ntBASIC6.94□□□□□ -1.3
HMGCS2P54868 RPS7P3-201ENST00000443360 580 ntBASIC6.94□□□□□ -1.3
HMGCS2P54868 AC073909.1-201ENST00000447112 999 ntBASIC6.94□□□□□ -1.3
HMGCS2P54868 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.94□□□□□ -1.3
HMGCS2P54868 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.94□□□□□ -1.3
HMGCS2P54868 AC093166.4-201ENST00000457867 318 ntBASIC6.94□□□□□ -1.3
HMGCS2P54868 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.94□□□□□ -1.3
HMGCS2P54868 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.94□□□□□ -1.3
HMGCS2P54868 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.94□□□□□ -1.3
HMGCS2P54868 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.94□□□□□ -1.3
HMGCS2P54868 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.94□□□□□ -1.3
HMGCS2P54868 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.94□□□□□ -1.3
HMGCS2P54868 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.94□□□□□ -1.3
HMGCS2P54868 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.94□□□□□ -1.3
HMGCS2P54868 AC020763.5-201ENST00000623298 430 ntBASIC6.94□□□□□ -1.3
HMGCS2P54868 AL691477.1-201ENST00000624398 162 ntBASIC6.94□□□□□ -1.3
HMGCS2P54868 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.94□□□□□ -1.3
HMGCS2P54868 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGCS2P54868 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGCS2P54868 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.94□□□□□ -1.3
HMGCS2P54868 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
HMGCS2P54868 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGCS2P54868 ASB8-201ENST00000317697 2615 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGCS2P54868 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGCS2P54868 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
HMGCS2P54868 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.93□□□□□ -1.3
HMGCS2P54868 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.93□□□□□ -1.3
HMGCS2P54868 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.93□□□□□ -1.3
HMGCS2P54868 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HMGCS2P54868 AC022905.1-201ENST00000503430 3048 ntBASIC6.93□□□□□ -1.3
HMGCS2P54868 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HMGCS2P54868 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.93□□□□□ -1.3
HMGCS2P54868 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HMGCS2P54868 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
HMGCS2P54868 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HMGCS2P54868 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
HMGCS2P54868 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
HMGCS2P54868 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.93□□□□□ -1.3
HMGCS2P54868 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.93□□□□□ -1.3
HMGCS2P54868 OR2AT2P-201ENST00000413438 905 ntBASIC6.93□□□□□ -1.3
HMGCS2P54868 MRPL53P1-201ENST00000414323 319 ntBASIC6.93□□□□□ -1.3
HMGCS2P54868 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.93□□□□□ -1.3
HMGCS2P54868 AK4P4-201ENST00000419465 646 ntBASIC6.93□□□□□ -1.3
HMGCS2P54868 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.93□□□□□ -1.3
HMGCS2P54868 EEF1B2P6-201ENST00000445713 673 ntBASIC6.93□□□□□ -1.3
HMGCS2P54868 AC104164.1-201ENST00000460282 590 ntBASIC6.93□□□□□ -1.3
HMGCS2P54868 RPS23P6-201ENST00000466136 431 ntBASIC6.93□□□□□ -1.3
HMGCS2P54868 AC138866.2-201ENST00000508650 584 ntBASIC6.93□□□□□ -1.3
HMGCS2P54868 SUMO2P7-201ENST00000511179 285 ntBASIC6.93□□□□□ -1.3
HMGCS2P54868 GAPDHP71-201ENST00000511530 1003 ntBASIC6.93□□□□□ -1.3
HMGCS2P54868 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.93□□□□□ -1.3
HMGCS2P54868 IGKV2-18-201ENST00000522607 343 ntBASIC6.93□□□□□ -1.3
HMGCS2P54868 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC6.93□□□□□ -1.3
HMGCS2P54868 AC027026.1-201ENST00000532323 742 ntBASIC6.93□□□□□ -1.3
HMGCS2P54868 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.93□□□□□ -1.3
HMGCS2P54868 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.93□□□□□ -1.3
HMGCS2P54868 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.93□□□□□ -1.3
HMGCS2P54868 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
HMGCS2P54868 AL021368.3-201ENST00000607119 578 ntBASIC6.93□□□□□ -1.3
HMGCS2P54868 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms