Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 RPSAP37-201ENST00000470913 821 ntBASIC6.7□□□□□ -1.34
NEK3P51956 AC098818.1-201ENST00000478593 252 ntBASIC6.7□□□□□ -1.34
NEK3P51956 RN7SL413P-201ENST00000482700 297 ntBASIC6.7□□□□□ -1.34
NEK3P51956 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.7□□□□□ -1.34
NEK3P51956 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC6.7□□□□□ -1.34
NEK3P51956 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC6.7□□□□□ -1.34
NEK3P51956 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.7□□□□□ -1.34
NEK3P51956 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.7□□□□□ -1.34
NEK3P51956 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC6.7□□□□□ -1.34
NEK3P51956 AL078623.1-201ENST00000602702 907 ntBASIC6.7□□□□□ -1.34
NEK3P51956 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC6.7□□□□□ -1.34
NEK3P51956 AC019131.2-201ENST00000609071 870 ntBASIC6.7□□□□□ -1.34
NEK3P51956 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.7□□□□□ -1.34
NEK3P51956 AC084824.5-201ENST00000612009 413 ntBASIC6.7□□□□□ -1.34
NEK3P51956 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.7□□□□□ -1.34
NEK3P51956 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.7□□□□□ -1.34
NEK3P51956 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
NEK3P51956 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NEK3P51956 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
NEK3P51956 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.7□□□□□ -1.34
NEK3P51956 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
NEK3P51956 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.7□□□□□ -1.34
NEK3P51956 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
NEK3P51956 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
NEK3P51956 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.69□□□□□ -1.34
NEK3P51956 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.69□□□□□ -1.34
NEK3P51956 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.69□□□□□ -1.34
NEK3P51956 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
NEK3P51956 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
NEK3P51956 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NEK3P51956 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NEK3P51956 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
NEK3P51956 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
NEK3P51956 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NEK3P51956 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
NEK3P51956 FAM32BP-201ENST00000344033 333 ntBASIC6.69□□□□□ -1.34
NEK3P51956 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
NEK3P51956 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.69□□□□□ -1.34
NEK3P51956 AL929472.1-201ENST00000417484 429 ntBASIC6.69□□□□□ -1.34
NEK3P51956 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC6.69□□□□□ -1.34
NEK3P51956 AC097721.1-201ENST00000427150 1253 ntBASIC6.69□□□□□ -1.34
NEK3P51956 OR6R1P-201ENST00000431838 940 ntBASIC6.69□□□□□ -1.34
NEK3P51956 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.69□□□□□ -1.34
NEK3P51956 GAPDHP75-201ENST00000433910 943 ntBASIC6.69□□□□□ -1.34
NEK3P51956 GAPDHP33-201ENST00000443168 1013 ntBASIC6.69□□□□□ -1.34
NEK3P51956 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.69□□□□□ -1.34
NEK3P51956 ZNF736P6Y-201ENST00000447526 1213 ntBASIC6.69□□□□□ -1.34
NEK3P51956 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NEK3P51956 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.69□□□□□ -1.34
NEK3P51956 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.69□□□□□ -1.34
NEK3P51956 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.69□□□□□ -1.34
NEK3P51956 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.69□□□□□ -1.34
NEK3P51956 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.69□□□□□ -1.34
NEK3P51956 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC6.69□□□□□ -1.34
NEK3P51956 AC093870.1-201ENST00000506837 213 ntBASIC6.69□□□□□ -1.34
NEK3P51956 AC083906.1-201ENST00000509298 406 ntBASIC6.69□□□□□ -1.34
NEK3P51956 AC021146.7-201ENST00000509604 775 ntBASIC6.69□□□□□ -1.34
NEK3P51956 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC6.69□□□□□ -1.34
NEK3P51956 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NEK3P51956 AC103833.1-201ENST00000517442 172 ntBASIC6.69□□□□□ -1.34
NEK3P51956 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NEK3P51956 AP001000.1-201ENST00000526843 742 ntBASIC6.69□□□□□ -1.34
NEK3P51956 AP003033.2-201ENST00000528901 805 ntBASIC6.69□□□□□ -1.34
NEK3P51956 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC6.69□□□□□ -1.34
NEK3P51956 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.69□□□□□ -1.34
NEK3P51956 AC233266.2-201ENST00000567067 528 ntBASIC6.69□□□□□ -1.34
NEK3P51956 AC025283.1-201ENST00000572039 734 ntBASIC6.69□□□□□ -1.34
NEK3P51956 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.69□□□□□ -1.34
NEK3P51956 AC245052.7-201ENST00000601161 359 ntBASIC6.69□□□□□ -1.34
NEK3P51956 AC098483.2-201ENST00000603158 454 ntBASIC6.69□□□□□ -1.34
NEK3P51956 AC114477.1-201ENST00000605097 605 ntBASIC6.69□□□□□ -1.34
NEK3P51956 AC019257.2-201ENST00000605539 497 ntBASIC6.69□□□□□ -1.34
NEK3P51956 AL356608.1-201ENST00000610034 820 ntBASIC6.69□□□□□ -1.34
NEK3P51956 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NEK3P51956 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC6.69□□□□□ -1.34
NEK3P51956 TCL6_3.1-201ENST00000619064 137 ntBASIC6.69□□□□□ -1.34
NEK3P51956 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NEK3P51956 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.69□□□□□ -1.34
NEK3P51956 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NEK3P51956 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.69□□□□□ -1.34
NEK3P51956 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NEK3P51956 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NEK3P51956 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NEK3P51956 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
NEK3P51956 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
NEK3P51956 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.69□□□□□ -1.34
NEK3P51956 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.69□□□□□ -1.34
NEK3P51956 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.68□□□□□ -1.34
NEK3P51956 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NEK3P51956 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
NEK3P51956 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.68□□□□□ -1.34
NEK3P51956 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.68□□□□□ -1.34
NEK3P51956 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.68□□□□□ -1.34
NEK3P51956 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
NEK3P51956 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
NEK3P51956 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.68□□□□□ -1.34
NEK3P51956 AC006511.3-201ENST00000624929 1783 ntBASIC6.68□□□□□ -1.34
NEK3P51956 SNORA70H-201ENST00000383910 135 ntBASIC6.68□□□□□ -1.34
NEK3P51956 U3.52-201ENST00000384034 216 ntBASIC6.68□□□□□ -1.34
NEK3P51956 SNORA70J-201ENST00000384182 135 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms