Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AL359742.1-201ENST00000622497 540 ntBASIC6.45□□□□□ -1.38
LHX1P48742 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LHX1P48742 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
LHX1P48742 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LHX1P48742 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
LHX1P48742 PSG10P-201ENST00000501199 1500 ntBASIC6.45□□□□□ -1.38
LHX1P48742 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LHX1P48742 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.44□□□□□ -1.38
LHX1P48742 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.44□□□□□ -1.38
LHX1P48742 AC012254.3-201ENST00000591183 2117 ntBASIC6.44□□□□□ -1.38
LHX1P48742 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
LHX1P48742 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
LHX1P48742 MAPK10-270ENST00000641102 3538 ntBASIC6.44□□□□□ -1.38
LHX1P48742 AP000641.1-201ENST00000531988 1639 ntBASIC6.44□□□□□ -1.38
LHX1P48742 AL353763.1-201ENST00000624467 1628 ntBASIC6.44□□□□□ -1.38
LHX1P48742 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
LHX1P48742 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.44□□□□□ -1.38
LHX1P48742 TMA16P2-201ENST00000413187 601 ntBASIC6.44□□□□□ -1.38
LHX1P48742 RPS17P17-201ENST00000419392 409 ntBASIC6.44□□□□□ -1.38
LHX1P48742 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.44□□□□□ -1.38
LHX1P48742 AC066692.1-201ENST00000421721 457 ntBASIC6.44□□□□□ -1.38
LHX1P48742 GAPDHP75-201ENST00000433910 943 ntBASIC6.44□□□□□ -1.38
LHX1P48742 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.44□□□□□ -1.38
LHX1P48742 RPL23AP40-201ENST00000487630 390 ntBASIC6.44□□□□□ -1.38
LHX1P48742 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.44□□□□□ -1.38
LHX1P48742 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.44□□□□□ -1.38
LHX1P48742 TPM3P3-201ENST00000521343 354 ntBASIC6.44□□□□□ -1.38
LHX1P48742 AC110056.1-201ENST00000525759 911 ntBASIC6.44□□□□□ -1.38
LHX1P48742 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.44□□□□□ -1.38
LHX1P48742 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.44□□□□□ -1.38
LHX1P48742 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.44□□□□□ -1.38
LHX1P48742 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.44□□□□□ -1.38
LHX1P48742 MIR4310-201ENST00000582950 57 ntBASIC6.44□□□□□ -1.38
LHX1P48742 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.44□□□□□ -1.38
LHX1P48742 AC119403.2-201ENST00000590960 598 ntBASIC6.44□□□□□ -1.38
LHX1P48742 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.44□□□□□ -1.38
LHX1P48742 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.44□□□□□ -1.38
LHX1P48742 AL136131.3-201ENST00000607600 188 ntBASIC6.44□□□□□ -1.38
LHX1P48742 MIR6793-201ENST00000612376 63 ntBASIC6.44□□□□□ -1.38
LHX1P48742 AL354950.1-201ENST00000614150 568 ntBASIC6.44□□□□□ -1.38
LHX1P48742 AL096712.1-201ENST00000614561 159 ntBASIC6.44□□□□□ -1.38
LHX1P48742 FO681491.1-202ENST00000623392 737 ntBASIC6.44□□□□□ -1.38
LHX1P48742 AC087821.1-201ENST00000623639 567 ntBASIC6.44□□□□□ -1.38
LHX1P48742 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.44□□□□□ -1.38
LHX1P48742 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.44□□□□□ -1.38
LHX1P48742 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
LHX1P48742 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.44□□□□□ -1.38
LHX1P48742 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
LHX1P48742 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
LHX1P48742 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
LHX1P48742 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
LHX1P48742 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.44□□□□□ -1.38
LHX1P48742 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LHX1P48742 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LHX1P48742 AC092724.1-201ENST00000624623 3397 ntBASIC6.43□□□□□ -1.38
LHX1P48742 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
LHX1P48742 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LHX1P48742 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
LHX1P48742 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LHX1P48742 BRD7P6-201ENST00000431406 1860 ntBASIC6.43□□□□□ -1.38
LHX1P48742 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
LHX1P48742 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
LHX1P48742 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.43□□□□□ -1.38
LHX1P48742 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
LHX1P48742 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LHX1P48742 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.43□□□□□ -1.38
LHX1P48742 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.43□□□□□ -1.38
LHX1P48742 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
LHX1P48742 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
LHX1P48742 AC023490.2-201ENST00000359859 470 ntBASIC6.43□□□□□ -1.38
LHX1P48742 RNA5SP477-201ENST00000362639 119 ntBASIC6.43□□□□□ -1.38
LHX1P48742 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
LHX1P48742 RNU6-167P-201ENST00000384292 106 ntBASIC6.43□□□□□ -1.38
LHX1P48742 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
LHX1P48742 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.43□□□□□ -1.38
LHX1P48742 PTCD2P2-201ENST00000415579 1095 ntBASIC6.43□□□□□ -1.38
LHX1P48742 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.43□□□□□ -1.38
LHX1P48742 AC079807.1-201ENST00000429993 481 ntBASIC6.43□□□□□ -1.38
LHX1P48742 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC6.43□□□□□ -1.38
LHX1P48742 VN1R110P-201ENST00000438988 971 ntBASIC6.43□□□□□ -1.38
LHX1P48742 RPL12P11-201ENST00000439970 501 ntBASIC6.43□□□□□ -1.38
LHX1P48742 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.43□□□□□ -1.38
LHX1P48742 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.43□□□□□ -1.38
LHX1P48742 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.43□□□□□ -1.38
LHX1P48742 AC023245.1-201ENST00000468501 517 ntBASIC6.43□□□□□ -1.38
LHX1P48742 OR5H7P-201ENST00000514084 930 ntBASIC6.43□□□□□ -1.38
LHX1P48742 SETP21-201ENST00000514799 892 ntBASIC6.43□□□□□ -1.38
LHX1P48742 AC060775.1-201ENST00000518241 520 ntBASIC6.43□□□□□ -1.38
LHX1P48742 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.43□□□□□ -1.38
LHX1P48742 NANOGNBP2-201ENST00000544753 553 ntBASIC6.43□□□□□ -1.38
LHX1P48742 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC6.43□□□□□ -1.38
LHX1P48742 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.43□□□□□ -1.38
LHX1P48742 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.43□□□□□ -1.38
LHX1P48742 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.43□□□□□ -1.38
LHX1P48742 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.43□□□□□ -1.38
LHX1P48742 MIR6809-201ENST00000612189 116 ntBASIC6.43□□□□□ -1.38
LHX1P48742 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.43□□□□□ -1.38
LHX1P48742 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.43□□□□□ -1.38
LHX1P48742 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
LHX1P48742 AC099654.3-201ENST00000447087 1546 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms