Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
APOBEC1P41238 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.66□□□□□ -1.5
APOBEC1P41238 MIR3189-201ENST00000578735 73 ntBASIC5.66□□□□□ -1.5
APOBEC1P41238 NPIPB1P-202ENST00000588786 828 ntBASIC5.66□□□□□ -1.5
APOBEC1P41238 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.66□□□□□ -1.5
APOBEC1P41238 AC106730.3-201ENST00000624568 641 ntBASIC5.66□□□□□ -1.5
APOBEC1P41238 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.66□□□□□ -1.5
APOBEC1P41238 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
APOBEC1P41238 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
APOBEC1P41238 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
APOBEC1P41238 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
APOBEC1P41238 AOX3P-204ENST00000491025 2107 ntBASIC5.66□□□□□ -1.5
APOBEC1P41238 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.66□□□□□ -1.5
APOBEC1P41238 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.66□□□□□ -1.5
APOBEC1P41238 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.66□□□□□ -1.5
APOBEC1P41238 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.66□□□□□ -1.5
APOBEC1P41238 AKAP17BP-201ENST00000431706 2719 ntBASIC5.66□□□□□ -1.5
APOBEC1P41238 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
APOBEC1P41238 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
APOBEC1P41238 CDY11P-201ENST00000447168 1651 ntBASIC5.66□□□□□ -1.5
APOBEC1P41238 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.66□□□□□ -1.5
APOBEC1P41238 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
APOBEC1P41238 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
APOBEC1P41238 AL359091.1-201ENST00000449048 1734 ntBASIC5.65□□□□□ -1.5
APOBEC1P41238 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.65□□□□□ -1.5
APOBEC1P41238 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.5
APOBEC1P41238 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
APOBEC1P41238 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
APOBEC1P41238 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.65□□□□□ -1.5
APOBEC1P41238 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.65□□□□□ -1.5
APOBEC1P41238 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
APOBEC1P41238 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
APOBEC1P41238 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
APOBEC1P41238 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
APOBEC1P41238 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.65□□□□□ -1.5
APOBEC1P41238 AC024341.1-201ENST00000526444 1552 ntBASIC5.65□□□□□ -1.5
APOBEC1P41238 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
APOBEC1P41238 RNU1-49P-201ENST00000363468 159 ntBASIC5.65□□□□□ -1.5
APOBEC1P41238 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
APOBEC1P41238 OR1F12-201ENST00000402365 945 ntBASIC5.65□□□□□ -1.5
APOBEC1P41238 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.65□□□□□ -1.5
APOBEC1P41238 RN7SKP144-201ENST00000411108 279 ntBASIC5.65□□□□□ -1.5
APOBEC1P41238 TMA16P2-201ENST00000413187 601 ntBASIC5.65□□□□□ -1.5
APOBEC1P41238 RCC2P2-201ENST00000422174 918 ntBASIC5.65□□□□□ -1.5
APOBEC1P41238 VN1R20P-201ENST00000425215 966 ntBASIC5.65□□□□□ -1.5
APOBEC1P41238 RPS7P14-201ENST00000426405 583 ntBASIC5.65□□□□□ -1.5
APOBEC1P41238 ZFAND6P1-201ENST00000434138 605 ntBASIC5.65□□□□□ -1.5
APOBEC1P41238 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.65□□□□□ -1.5
APOBEC1P41238 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
APOBEC1P41238 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.65□□□□□ -1.5
APOBEC1P41238 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.65□□□□□ -1.5
APOBEC1P41238 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.65□□□□□ -1.5
APOBEC1P41238 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.65□□□□□ -1.5
APOBEC1P41238 HMGN1P16-201ENST00000508308 283 ntBASIC5.65□□□□□ -1.5
APOBEC1P41238 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.65□□□□□ -1.5
APOBEC1P41238 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.65□□□□□ -1.5
APOBEC1P41238 RNA5SP206-201ENST00000516703 121 ntBASIC5.65□□□□□ -1.5
APOBEC1P41238 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.65□□□□□ -1.5
APOBEC1P41238 OR7E10P-201ENST00000526420 991 ntBASIC5.65□□□□□ -1.5
APOBEC1P41238 AP001000.1-201ENST00000526843 742 ntBASIC5.65□□□□□ -1.5
APOBEC1P41238 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.65□□□□□ -1.5
APOBEC1P41238 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.65□□□□□ -1.5
APOBEC1P41238 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.65□□□□□ -1.5
APOBEC1P41238 AC005014.3-201ENST00000605985 190 ntBASIC5.65□□□□□ -1.5
APOBEC1P41238 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.65□□□□□ -1.5
APOBEC1P41238 AC018659.2-201ENST00000624690 715 ntBASIC5.65□□□□□ -1.5
APOBEC1P41238 AC080188.3-201ENST00000624842 748 ntBASIC5.65□□□□□ -1.5
APOBEC1P41238 AC003992.1-201ENST00000635364 557 ntBASIC5.65□□□□□ -1.5
APOBEC1P41238 AC099654.15-201ENST00000639802 509 ntBASIC5.65□□□□□ -1.5
APOBEC1P41238 AC096921.2-201ENST00000561507 1916 ntBASIC5.65□□□□□ -1.51
APOBEC1P41238 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.65□□□□□ -1.51
APOBEC1P41238 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
APOBEC1P41238 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
APOBEC1P41238 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
APOBEC1P41238 AC078880.4-201ENST00000617627 1749 ntBASIC5.65□□□□□ -1.51
APOBEC1P41238 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
APOBEC1P41238 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
APOBEC1P41238 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
APOBEC1P41238 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
APOBEC1P41238 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
APOBEC1P41238 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.64□□□□□ -1.51
APOBEC1P41238 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.64□□□□□ -1.51
APOBEC1P41238 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
APOBEC1P41238 AP001541.1-201ENST00000623322 1904 ntBASIC5.64□□□□□ -1.51
APOBEC1P41238 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.64□□□□□ -1.51
APOBEC1P41238 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
APOBEC1P41238 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
APOBEC1P41238 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
APOBEC1P41238 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
APOBEC1P41238 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.64□□□□□ -1.51
APOBEC1P41238 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
APOBEC1P41238 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
APOBEC1P41238 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
APOBEC1P41238 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
APOBEC1P41238 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
APOBEC1P41238 RNU6-618P-201ENST00000363518 112 ntBASIC5.64□□□□□ -1.51
APOBEC1P41238 RNA5SP346-201ENST00000363541 121 ntBASIC5.64□□□□□ -1.51
APOBEC1P41238 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
APOBEC1P41238 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.64□□□□□ -1.51
APOBEC1P41238 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms