Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
HNF4AP41235 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC6.09□□□□□ -1.43
HNF4AP41235 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HNF4AP41235 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
HNF4AP41235 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HNF4AP41235 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
HNF4AP41235 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
HNF4AP41235 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HNF4AP41235 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.09□□□□□ -1.43
HNF4AP41235 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HNF4AP41235 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.09□□□□□ -1.43
HNF4AP41235 RPL11P4-201ENST00000332269 436 ntBASIC6.09□□□□□ -1.43
HNF4AP41235 MIR433-201ENST00000384837 93 ntBASIC6.09□□□□□ -1.43
HNF4AP41235 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HNF4AP41235 RPL21P50-201ENST00000417698 477 ntBASIC6.09□□□□□ -1.43
HNF4AP41235 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.09□□□□□ -1.43
HNF4AP41235 Z82198.3-201ENST00000421145 199 ntBASIC6.09□□□□□ -1.43
HNF4AP41235 LINC00328-2P-201ENST00000436585 219 ntBASIC6.09□□□□□ -1.43
HNF4AP41235 EMC3-AS1-205ENST00000438698 534 ntBASIC6.09□□□□□ -1.43
HNF4AP41235 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.09□□□□□ -1.43
HNF4AP41235 AC079922.1-201ENST00000443291 359 ntBASIC6.09□□□□□ -1.43
HNF4AP41235 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.09□□□□□ -1.43
HNF4AP41235 MARK2P8-201ENST00000476069 952 ntBASIC6.09□□□□□ -1.43
HNF4AP41235 RPL29P23-201ENST00000486188 442 ntBASIC6.09□□□□□ -1.43
HNF4AP41235 MTCO3P42-201ENST00000509488 518 ntBASIC6.09□□□□□ -1.43
HNF4AP41235 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.09□□□□□ -1.43
HNF4AP41235 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HNF4AP41235 MTCO3P39-201ENST00000514812 518 ntBASIC6.09□□□□□ -1.43
HNF4AP41235 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.09□□□□□ -1.43
HNF4AP41235 AC116917.1-201ENST00000520558 305 ntBASIC6.09□□□□□ -1.43
HNF4AP41235 OR4H6P-201ENST00000563771 921 ntBASIC6.09□□□□□ -1.43
HNF4AP41235 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC6.09□□□□□ -1.43
HNF4AP41235 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.09□□□□□ -1.43
HNF4AP41235 AC005332.4-201ENST00000592752 579 ntBASIC6.09□□□□□ -1.43
HNF4AP41235 AL589863.1-201ENST00000595383 631 ntBASIC6.09□□□□□ -1.43
HNF4AP41235 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.09□□□□□ -1.43
HNF4AP41235 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.09□□□□□ -1.43
HNF4AP41235 AC009237.12-201ENST00000604755 742 ntBASIC6.09□□□□□ -1.43
HNF4AP41235 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.09□□□□□ -1.43
HNF4AP41235 AC006924.1-201ENST00000610750 559 ntBASIC6.09□□□□□ -1.43
HNF4AP41235 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.09□□□□□ -1.43
HNF4AP41235 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.09□□□□□ -1.43
HNF4AP41235 AC048341.3-201ENST00000619323 491 ntBASIC6.09□□□□□ -1.43
HNF4AP41235 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HNF4AP41235 AL122023.1-201ENST00000622847 530 ntBASIC6.09□□□□□ -1.43
HNF4AP41235 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.09□□□□□ -1.43
HNF4AP41235 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.09□□□□□ -1.43
HNF4AP41235 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.09□□□□□ -1.43
HNF4AP41235 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HNF4AP41235 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HNF4AP41235 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.09□□□□□ -1.43
HNF4AP41235 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HNF4AP41235 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HNF4AP41235 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
HNF4AP41235 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.09□□□□□ -1.44
HNF4AP41235 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.09□□□□□ -1.44
HNF4AP41235 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.09□□□□□ -1.44
HNF4AP41235 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
HNF4AP41235 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HNF4AP41235 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
HNF4AP41235 AL161912.4-201ENST00000623889 2468 ntBASIC6.08□□□□□ -1.44
HNF4AP41235 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.08□□□□□ -1.44
HNF4AP41235 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HNF4AP41235 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HNF4AP41235 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
HNF4AP41235 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HNF4AP41235 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.08□□□□□ -1.44
HNF4AP41235 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
HNF4AP41235 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.08□□□□□ -1.44
HNF4AP41235 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HNF4AP41235 SEPT7P8-201ENST00000413308 775 ntBASIC6.08□□□□□ -1.44
HNF4AP41235 RAB9AP4-201ENST00000415230 609 ntBASIC6.08□□□□□ -1.44
HNF4AP41235 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.08□□□□□ -1.44
HNF4AP41235 AL360013.1-201ENST00000419031 858 ntBASIC6.08□□□□□ -1.44
HNF4AP41235 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.08□□□□□ -1.44
HNF4AP41235 RPL7AP51-201ENST00000422016 760 ntBASIC6.08□□□□□ -1.44
HNF4AP41235 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.08□□□□□ -1.44
HNF4AP41235 OSTCP4-201ENST00000424397 449 ntBASIC6.08□□□□□ -1.44
HNF4AP41235 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
HNF4AP41235 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.08□□□□□ -1.44
HNF4AP41235 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.08□□□□□ -1.44
HNF4AP41235 MORF4-201ENST00000447135 971 ntBASIC6.08□□□□□ -1.44
HNF4AP41235 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.08□□□□□ -1.44
HNF4AP41235 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.08□□□□□ -1.44
HNF4AP41235 AGGF1P3-201ENST00000493675 1213 ntBASIC6.08□□□□□ -1.44
HNF4AP41235 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.08□□□□□ -1.44
HNF4AP41235 HNRNPRP2-201ENST00000528421 743 ntBASIC6.08□□□□□ -1.44
HNF4AP41235 AP001804.2-201ENST00000533932 910 ntBASIC6.08□□□□□ -1.44
HNF4AP41235 AC008055.1-201ENST00000547032 609 ntBASIC6.08□□□□□ -1.44
HNF4AP41235 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.08□□□□□ -1.44
HNF4AP41235 MIR3189-201ENST00000578735 73 ntBASIC6.08□□□□□ -1.44
HNF4AP41235 AL021368.3-201ENST00000607119 578 ntBASIC6.08□□□□□ -1.44
HNF4AP41235 AC116667.2-201ENST00000641075 823 ntBASIC6.08□□□□□ -1.44
HNF4AP41235 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HNF4AP41235 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.08□□□□□ -1.44
HNF4AP41235 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.08□□□□□ -1.44
HNF4AP41235 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HNF4AP41235 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HNF4AP41235 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HNF4AP41235 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms