Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.47□□□□□ -1.37
CTNNA1P35221 SNX18P24-201ENST00000505249 671 ntBASIC6.47□□□□□ -1.37
CTNNA1P35221 KHDC1P1-201ENST00000511053 508 ntBASIC6.47□□□□□ -1.37
CTNNA1P35221 AC021146.10-201ENST00000515628 706 ntBASIC6.47□□□□□ -1.37
CTNNA1P35221 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CTNNA1P35221 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.47□□□□□ -1.37
CTNNA1P35221 AC008126.1-201ENST00000549019 480 ntBASIC6.47□□□□□ -1.37
CTNNA1P35221 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.47□□□□□ -1.37
CTNNA1P35221 Z93930.3-201ENST00000607919 749 ntBASIC6.47□□□□□ -1.37
CTNNA1P35221 AP005212.4-201ENST00000614206 710 ntBASIC6.47□□□□□ -1.37
CTNNA1P35221 AC091059.2-201ENST00000623355 614 ntBASIC6.47□□□□□ -1.37
CTNNA1P35221 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
CTNNA1P35221 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
CTNNA1P35221 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CTNNA1P35221 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CTNNA1P35221 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
CTNNA1P35221 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
CTNNA1P35221 KYNUP3-201ENST00000574386 1341 ntBASIC6.47□□□□□ -1.37
CTNNA1P35221 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CTNNA1P35221 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CTNNA1P35221 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.47□□□□□ -1.37
CTNNA1P35221 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CTNNA1P35221 Z95114.1-201ENST00000624264 14574 ntBASIC6.47□□□□□ -1.37
CTNNA1P35221 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
CTNNA1P35221 AL133243.2-201ENST00000610331 1621 ntBASIC6.47□□□□□ -1.37
CTNNA1P35221 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.46□□□□□ -1.37
CTNNA1P35221 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.46□□□□□ -1.37
CTNNA1P35221 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.46□□□□□ -1.37
CTNNA1P35221 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CTNNA1P35221 MTND5P23-201ENST00000430812 1655 ntBASIC6.46□□□□□ -1.37
CTNNA1P35221 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.37
CTNNA1P35221 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.46□□□□□ -1.37
CTNNA1P35221 AL591135.1-201ENST00000401578 5914 ntBASIC6.46□□□□□ -1.37
CTNNA1P35221 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CTNNA1P35221 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CTNNA1P35221 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CTNNA1P35221 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CTNNA1P35221 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CTNNA1P35221 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CTNNA1P35221 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.46□□□□□ -1.38
CTNNA1P35221 MIR1266-201ENST00000408125 84 ntBASIC6.46□□□□□ -1.38
CTNNA1P35221 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.46□□□□□ -1.38
CTNNA1P35221 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.46□□□□□ -1.38
CTNNA1P35221 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.46□□□□□ -1.38
CTNNA1P35221 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CTNNA1P35221 IGLV3-4-201ENST00000432300 244 ntBASIC6.46□□□□□ -1.38
CTNNA1P35221 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC6.46□□□□□ -1.38
CTNNA1P35221 PPIAP10-201ENST00000438675 458 ntBASIC6.46□□□□□ -1.38
CTNNA1P35221 SNRPFP2-201ENST00000440710 251 ntBASIC6.46□□□□□ -1.38
CTNNA1P35221 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC6.46□□□□□ -1.38
CTNNA1P35221 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.46□□□□□ -1.38
CTNNA1P35221 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.46□□□□□ -1.38
CTNNA1P35221 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CTNNA1P35221 AC012123.2-201ENST00000485809 248 ntBASIC6.46□□□□□ -1.38
CTNNA1P35221 AL133372.1-201ENST00000493565 745 ntBASIC6.46□□□□□ -1.38
CTNNA1P35221 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.46□□□□□ -1.38
CTNNA1P35221 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CTNNA1P35221 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.46□□□□□ -1.38
CTNNA1P35221 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CTNNA1P35221 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
CTNNA1P35221 LINC00556-201ENST00000569603 412 ntBASIC6.46□□□□□ -1.38
CTNNA1P35221 AP005901.4-201ENST00000577336 569 ntBASIC6.46□□□□□ -1.38
CTNNA1P35221 RNU4ATAC-201ENST00000580972 127 ntBASIC6.46□□□□□ -1.38
CTNNA1P35221 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.46□□□□□ -1.38
CTNNA1P35221 AC010615.3-201ENST00000597319 394 ntBASIC6.46□□□□□ -1.38
CTNNA1P35221 AC036176.3-201ENST00000602456 418 ntBASIC6.46□□□□□ -1.38
CTNNA1P35221 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.46□□□□□ -1.38
CTNNA1P35221 AC068726.1-201ENST00000610993 341 ntBASIC6.46□□□□□ -1.38
CTNNA1P35221 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.46□□□□□ -1.38
CTNNA1P35221 MIR6070-201ENST00000613967 103 ntBASIC6.46□□□□□ -1.38
CTNNA1P35221 AC068213.1-201ENST00000625124 226 ntBASIC6.46□□□□□ -1.38
CTNNA1P35221 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.46□□□□□ -1.38
CTNNA1P35221 AC000095.2-202ENST00000637415 154 ntBASIC6.46□□□□□ -1.38
CTNNA1P35221 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CTNNA1P35221 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CTNNA1P35221 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
CTNNA1P35221 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.46□□□□□ -1.38
CTNNA1P35221 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
CTNNA1P35221 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC6.46□□□□□ -1.38
CTNNA1P35221 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.46□□□□□ -1.38
CTNNA1P35221 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CTNNA1P35221 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.46□□□□□ -1.38
CTNNA1P35221 AC140134.1-201ENST00000511830 3544 ntBASIC6.46□□□□□ -1.38
CTNNA1P35221 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.46□□□□□ -1.38
CTNNA1P35221 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
CTNNA1P35221 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CTNNA1P35221 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
CTNNA1P35221 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.45□□□□□ -1.38
CTNNA1P35221 WDR95P-201ENST00000425638 1542 ntBASIC6.45□□□□□ -1.38
CTNNA1P35221 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.45□□□□□ -1.38
CTNNA1P35221 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CTNNA1P35221 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CTNNA1P35221 AC025470.1-201ENST00000510053 2032 ntBASIC6.45□□□□□ -1.38
CTNNA1P35221 AL355834.1-201ENST00000556602 3965 ntBASIC6.45□□□□□ -1.38
CTNNA1P35221 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CTNNA1P35221 AC022306.1-201ENST00000560489 1562 ntBASIC6.45□□□□□ -1.38
CTNNA1P35221 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
CTNNA1P35221 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CTNNA1P35221 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CTNNA1P35221 RNU6-1331P-201ENST00000363658 106 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms