Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 FAM106CP-201ENST00000582212 507 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXC12P31275 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC12P31275 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXC12P31275 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC12P31275 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC12P31275 AC011374.2-201ENST00000607135 526 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 AC012510.1-201ENST00000607946 759 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 VN1R74P-201ENST00000613259 503 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 AC006335.3-201ENST00000613408 292 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC12P31275 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC6.58□□□□□ -1.36
HOXC12P31275 FRG1HP-204ENST00000617940 757 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC12P31275 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC12P31275 RN7SL680P-201ENST00000620379 299 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 MIR6813-201ENST00000621638 56 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 AC109454.4-201ENST00000623411 649 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 AC129908.1-201ENST00000624553 648 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC12P31275 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC12P31275 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC12P31275 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
HOXC12P31275 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
HOXC12P31275 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC12P31275 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.58□□□□□ -1.36
HOXC12P31275 ZNF658B-201ENST00000602828 3408 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC12P31275 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC12P31275 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC12P31275 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC12P31275 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC6.58□□□□□ -1.36
HOXC12P31275 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC12P31275 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC12P31275 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC6.58□□□□□ -1.36
HOXC12P31275 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC12P31275 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC12P31275 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HOXC12P31275 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
HOXC12P31275 AC073055.1-201ENST00000456901 1621 ntBASIC6.58□□□□□ -1.36
HOXC12P31275 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXC12P31275 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.57□□□□□ -1.36
HOXC12P31275 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
HOXC12P31275 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXC12P31275 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.57□□□□□ -1.36
HOXC12P31275 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HOXC12P31275 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXC12P31275 TRIM53CP-201ENST00000531490 1354 ntBASIC6.57□□□□□ -1.36
HOXC12P31275 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HOXC12P31275 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXC12P31275 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
HOXC12P31275 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXC12P31275 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.57□□□□□ -1.36
HOXC12P31275 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXC12P31275 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.57□□□□□ -1.36
HOXC12P31275 ZNF438-202ENST00000361310 3144 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXC12P31275 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXC12P31275 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.57□□□□□ -1.36
HOXC12P31275 AL034417.4-202ENST00000642135 2236 ntBASIC6.57□□□□□ -1.36
HOXC12P31275 AL353795.1-201ENST00000439134 1775 ntBASIC6.57□□□□□ -1.36
HOXC12P31275 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC6.57□□□□□ -1.36
HOXC12P31275 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
HOXC12P31275 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
HOXC12P31275 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.57□□□□□ -1.36
HOXC12P31275 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXC12P31275 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.57□□□□□ -1.36
HOXC12P31275 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HOXC12P31275 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXC12P31275 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXC12P31275 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXC12P31275 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC6.57□□□□□ -1.36
HOXC12P31275 ATP5F1P3-201ENST00000397213 657 ntBASIC6.57□□□□□ -1.36
HOXC12P31275 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
HOXC12P31275 SNORA11D-201ENST00000408548 128 ntBASIC6.57□□□□□ -1.36
HOXC12P31275 SNORA11E-201ENST00000408778 128 ntBASIC6.57□□□□□ -1.36
HOXC12P31275 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC6.57□□□□□ -1.36
HOXC12P31275 AC093084.1-201ENST00000424233 687 ntBASIC6.57□□□□□ -1.36
HOXC12P31275 AL593851.1-201ENST00000426171 157 ntBASIC6.57□□□□□ -1.36
HOXC12P31275 VN1R35P-201ENST00000428102 693 ntBASIC6.57□□□□□ -1.36
HOXC12P31275 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC6.57□□□□□ -1.36
HOXC12P31275 RPL35P8-201ENST00000433284 337 ntBASIC6.57□□□□□ -1.36
HOXC12P31275 AC093716.1-201ENST00000435923 377 ntBASIC6.57□□□□□ -1.36
HOXC12P31275 MRPS21P3-201ENST00000436696 262 ntBASIC6.57□□□□□ -1.36
HOXC12P31275 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
HOXC12P31275 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC6.57□□□□□ -1.36
HOXC12P31275 RPL7L1P11-201ENST00000446092 721 ntBASIC6.57□□□□□ -1.36
HOXC12P31275 ELOCP30-201ENST00000447108 299 ntBASIC6.57□□□□□ -1.36
HOXC12P31275 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.57□□□□□ -1.36
HOXC12P31275 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HOXC12P31275 ATP5A1P7-201ENST00000453978 1279 ntBASIC6.57□□□□□ -1.36
HOXC12P31275 CEACAMP11-201ENST00000455211 583 ntBASIC6.57□□□□□ -1.36
HOXC12P31275 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.57□□□□□ -1.36
HOXC12P31275 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC6.57□□□□□ -1.36
HOXC12P31275 AL928654.1-201ENST00000476081 354 ntBASIC6.57□□□□□ -1.36
HOXC12P31275 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HOXC12P31275 CDH12P2-201ENST00000504393 298 ntBASIC6.57□□□□□ -1.36
HOXC12P31275 CFI-204ENST00000510800 667 ntTSL 2 BASIC6.57□□□□□ -1.36
HOXC12P31275 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC6.57□□□□□ -1.36
HOXC12P31275 PHBP2-201ENST00000532859 806 ntBASIC6.57□□□□□ -1.36
HOXC12P31275 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms