Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC8.51□□□□□ -1.05
RXRBP28702 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC8.51□□□□□ -1.05
RXRBP28702 AC027319.1-201ENST00000591657 511 ntTSL 3 BASIC8.51□□□□□ -1.05
RXRBP28702 GMFG-212ENST00000602185 423 ntTSL 3 BASIC8.51□□□□□ -1.05
RXRBP28702 AC005252.1-201ENST00000604518 1063 ntBASIC8.51□□□□□ -1.05
RXRBP28702 IGLCOR22-2-201ENST00000605398 313 ntBASIC8.51□□□□□ -1.05
RXRBP28702 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
RXRBP28702 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
RXRBP28702 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC8.51□□□□□ -1.05
RXRBP28702 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC8.51□□□□□ -1.05
RXRBP28702 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
RXRBP28702 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
RXRBP28702 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC8.51□□□□□ -1.05
RXRBP28702 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
RXRBP28702 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
RXRBP28702 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
RXRBP28702 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
RXRBP28702 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
RXRBP28702 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
RXRBP28702 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC8.51□□□□□ -1.05
RXRBP28702 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
RXRBP28702 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
RXRBP28702 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC8.51□□□□□ -1.05
RXRBP28702 AL353743.3-201ENST00000442109 1468 ntBASIC8.51□□□□□ -1.05
RXRBP28702 AC013268.3-201ENST00000262716 2324 ntBASIC8.51□□□□□ -1.05
RXRBP28702 C8orf37-201ENST00000286688 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
RXRBP28702 API5-210ENST00000534600 1760 ntTSL 5 BASIC8.5□□□□□ -1.05
RXRBP28702 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC8.5□□□□□ -1.05
RXRBP28702 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC8.5□□□□□ -1.05
RXRBP28702 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
RXRBP28702 WDR95P-201ENST00000425638 1542 ntBASIC8.5□□□□□ -1.05
RXRBP28702 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
RXRBP28702 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC8.5□□□□□ -1.05
RXRBP28702 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
RXRBP28702 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
RXRBP28702 RNA5SP346-201ENST00000363541 121 ntBASIC8.5□□□□□ -1.05
RXRBP28702 AL445238.1-204ENST00000400311 463 ntBASIC8.5□□□□□ -1.05
RXRBP28702 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC8.5□□□□□ -1.05
RXRBP28702 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC8.5□□□□□ -1.05
RXRBP28702 AC023141.6-201ENST00000429418 337 ntBASIC8.5□□□□□ -1.05
RXRBP28702 DPY19L2P2-203ENST00000435536 1858 ntBASIC8.5□□□□□ -1.05
RXRBP28702 AC002504.1-201ENST00000438281 691 ntBASIC8.5□□□□□ -1.05
RXRBP28702 THAP5P1-201ENST00000439089 262 ntBASIC8.5□□□□□ -1.05
RXRBP28702 EEF1B2P6-201ENST00000445713 673 ntBASIC8.5□□□□□ -1.05
RXRBP28702 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RXRBP28702 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC8.5□□□□□ -1.05
RXRBP28702 NDUFAF4P3-201ENST00000456468 525 ntBASIC8.5□□□□□ -1.05
RXRBP28702 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC8.5□□□□□ -1.05
RXRBP28702 MTND6P8-201ENST00000503471 522 ntBASIC8.5□□□□□ -1.05
RXRBP28702 AC020699.1-201ENST00000505161 445 ntBASIC8.5□□□□□ -1.05
RXRBP28702 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC8.5□□□□□ -1.05
RXRBP28702 CR383658.1-201ENST00000514609 734 ntBASIC8.5□□□□□ -1.05
RXRBP28702 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC8.5□□□□□ -1.05
RXRBP28702 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC8.5□□□□□ -1.05
RXRBP28702 LDHC-203ENST00000535809 757 ntTSL 5 BASIC8.5□□□□□ -1.05
RXRBP28702 LDHC-205ENST00000537486 583 ntTSL 5 BASIC8.5□□□□□ -1.05
RXRBP28702 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC8.5□□□□□ -1.05
RXRBP28702 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC8.5□□□□□ -1.05
RXRBP28702 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC8.5□□□□□ -1.05
RXRBP28702 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC8.5□□□□□ -1.05
RXRBP28702 AP005119.1-201ENST00000580956 292 ntBASIC8.5□□□□□ -1.05
RXRBP28702 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC8.5□□□□□ -1.05
RXRBP28702 AC022022.2-201ENST00000602989 360 ntBASIC8.5□□□□□ -1.05
RXRBP28702 AL157899.1-201ENST00000604110 936 ntBASIC8.5□□□□□ -1.05
RXRBP28702 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC8.5□□□□□ -1.05
RXRBP28702 AC007275.1-201ENST00000621243 671 ntBASIC8.5□□□□□ -1.05
RXRBP28702 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC8.5□□□□□ -1.05
RXRBP28702 AP006248.3-201ENST00000623580 594 ntBASIC8.5□□□□□ -1.05
RXRBP28702 AL121594.5-201ENST00000631724 573 ntBASIC8.5□□□□□ -1.05
RXRBP28702 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC8.5□□□□□ -1.05
RXRBP28702 OR8G3P-202ENST00000641572 1255 ntBASIC8.5□□□□□ -1.05
RXRBP28702 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RXRBP28702 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC8.5□□□□□ -1.05
RXRBP28702 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RXRBP28702 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
RXRBP28702 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RXRBP28702 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RXRBP28702 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC8.5□□□□□ -1.05
RXRBP28702 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC8.5□□□□□ -1.05
RXRBP28702 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
RXRBP28702 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC8.5□□□□□ -1.05
RXRBP28702 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC8.5□□□□□ -1.05
RXRBP28702 NF1-214ENST00000490416 1329 ntTSL 3 BASIC8.5□□□□□ -1.05
RXRBP28702 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RXRBP28702 PSG10P-201ENST00000501199 1500 ntBASIC8.49□□□□□ -1.05
RXRBP28702 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RXRBP28702 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RXRBP28702 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RXRBP28702 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC8.49□□□□□ -1.05
RXRBP28702 Z97989.1-201ENST00000531702 2421 ntBASIC8.49□□□□□ -1.05
RXRBP28702 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
RXRBP28702 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
RXRBP28702 THAP12P7-201ENST00000520248 2290 ntBASIC8.49□□□□□ -1.05
RXRBP28702 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC8.49□□□□□ -1.05
RXRBP28702 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RXRBP28702 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RXRBP28702 RNU6-1257P-201ENST00000384625 110 ntBASIC8.49□□□□□ -1.05
RXRBP28702 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC8.49□□□□□ -1.05
RXRBP28702 CFL1P1-202ENST00000432948 411 ntBASIC8.49□□□□□ -1.05
RXRBP28702 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms