Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.95□□□□□ -1.46
ABCD3P28288 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
ABCD3P28288 AL391261.1-201ENST00000555712 1479 ntBASIC5.95□□□□□ -1.46
ABCD3P28288 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
ABCD3P28288 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
ABCD3P28288 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
ABCD3P28288 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
ABCD3P28288 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
ABCD3P28288 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.94□□□□□ -1.46
ABCD3P28288 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
ABCD3P28288 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.94□□□□□ -1.46
ABCD3P28288 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ABCD3P28288 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.94□□□□□ -1.46
ABCD3P28288 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.94□□□□□ -1.46
ABCD3P28288 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ABCD3P28288 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
ABCD3P28288 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ABCD3P28288 AC022905.1-201ENST00000503430 3048 ntBASIC5.94□□□□□ -1.46
ABCD3P28288 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.94□□□□□ -1.46
ABCD3P28288 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.94□□□□□ -1.46
ABCD3P28288 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.94□□□□□ -1.46
ABCD3P28288 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ABCD3P28288 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
ABCD3P28288 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ABCD3P28288 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
ABCD3P28288 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
ABCD3P28288 SNORD35A-201ENST00000363389 86 ntBASIC5.94□□□□□ -1.46
ABCD3P28288 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.94□□□□□ -1.46
ABCD3P28288 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.94□□□□□ -1.46
ABCD3P28288 GSTA12P-201ENST00000402398 508 ntBASIC5.94□□□□□ -1.46
ABCD3P28288 BTF3P9-201ENST00000418784 283 ntBASIC5.94□□□□□ -1.46
ABCD3P28288 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.94□□□□□ -1.46
ABCD3P28288 MTND4LP13-201ENST00000425022 298 ntBASIC5.94□□□□□ -1.46
ABCD3P28288 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.94□□□□□ -1.46
ABCD3P28288 AL390879.2-203ENST00000426943 1121 ntBASIC5.94□□□□□ -1.46
ABCD3P28288 GTF3AP6-201ENST00000432585 986 ntBASIC5.94□□□□□ -1.46
ABCD3P28288 AC013403.1-201ENST00000436954 263 ntBASIC5.94□□□□□ -1.46
ABCD3P28288 AC245517.2-201ENST00000442890 346 ntBASIC5.94□□□□□ -1.46
ABCD3P28288 AL627224.1-201ENST00000448334 444 ntBASIC5.94□□□□□ -1.46
ABCD3P28288 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.94□□□□□ -1.46
ABCD3P28288 RN7SL39P-201ENST00000462264 297 ntBASIC5.94□□□□□ -1.46
ABCD3P28288 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.94□□□□□ -1.46
ABCD3P28288 AC044810.1-201ENST00000480271 711 ntBASIC5.94□□□□□ -1.46
ABCD3P28288 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.94□□□□□ -1.46
ABCD3P28288 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.94□□□□□ -1.46
ABCD3P28288 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.94□□□□□ -1.46
ABCD3P28288 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.94□□□□□ -1.46
ABCD3P28288 SNORA26.10-201ENST00000516427 141 ntBASIC5.94□□□□□ -1.46
ABCD3P28288 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.94□□□□□ -1.46
ABCD3P28288 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ABCD3P28288 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC5.94□□□□□ -1.46
ABCD3P28288 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
ABCD3P28288 AP001496.3-201ENST00000580230 913 ntBASIC5.94□□□□□ -1.46
ABCD3P28288 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.94□□□□□ -1.46
ABCD3P28288 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.94□□□□□ -1.46
ABCD3P28288 AC063977.7-201ENST00000594454 337 ntBASIC5.94□□□□□ -1.46
ABCD3P28288 AL589765.6-201ENST00000601909 549 ntBASIC5.94□□□□□ -1.46
ABCD3P28288 AC012368.3-201ENST00000604190 219 ntBASIC5.94□□□□□ -1.46
ABCD3P28288 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.94□□□□□ -1.46
ABCD3P28288 AL132640.3-201ENST00000630473 177 ntBASIC5.94□□□□□ -1.46
ABCD3P28288 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.94□□□□□ -1.46
ABCD3P28288 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
ABCD3P28288 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.94□□□□□ -1.46
ABCD3P28288 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
ABCD3P28288 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.94□□□□□ -1.46
ABCD3P28288 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
ABCD3P28288 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.94□□□□□ -1.46
ABCD3P28288 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ABCD3P28288 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ABCD3P28288 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.94□□□□□ -1.46
ABCD3P28288 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ABCD3P28288 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.94□□□□□ -1.46
ABCD3P28288 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ABCD3P28288 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
ABCD3P28288 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
ABCD3P28288 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.94□□□□□ -1.46
ABCD3P28288 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.94□□□□□ -1.46
ABCD3P28288 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
ABCD3P28288 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
ABCD3P28288 AC114876.1-201ENST00000490962 1366 ntBASIC5.93□□□□□ -1.46
ABCD3P28288 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
ABCD3P28288 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.93□□□□□ -1.46
ABCD3P28288 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.93□□□□□ -1.46
ABCD3P28288 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.93□□□□□ -1.46
ABCD3P28288 AC125238.2-201ENST00000430003 1440 ntBASIC5.93□□□□□ -1.46
ABCD3P28288 AC011455.2-201ENST00000599320 3336 ntBASIC5.93□□□□□ -1.46
ABCD3P28288 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ABCD3P28288 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ABCD3P28288 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.93□□□□□ -1.46
ABCD3P28288 AC006213.6-201ENST00000623722 4179 ntBASIC5.93□□□□□ -1.46
ABCD3P28288 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ABCD3P28288 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
ABCD3P28288 FAM32BP-201ENST00000344033 333 ntBASIC5.93□□□□□ -1.46
ABCD3P28288 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ABCD3P28288 RNA5SP350-201ENST00000363298 111 ntBASIC5.93□□□□□ -1.46
ABCD3P28288 RNA5SP333-201ENST00000363466 118 ntBASIC5.93□□□□□ -1.46
ABCD3P28288 SNORD115-48-201ENST00000364764 76 ntBASIC5.93□□□□□ -1.46
ABCD3P28288 RNA5SP334-201ENST00000364825 118 ntBASIC5.93□□□□□ -1.46
ABCD3P28288 OR6K3-202ENST00000368146 996 ntBASIC5.93□□□□□ -1.46
ABCD3P28288 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms