Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.13□□□□□ -1.59
COL8A2P25067 AC068305.2-201ENST00000550567 1205 ntBASIC5.13□□□□□ -1.59
COL8A2P25067 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.13□□□□□ -1.59
COL8A2P25067 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC5.13□□□□□ -1.59
COL8A2P25067 AC005244.1-201ENST00000582566 339 ntBASIC5.13□□□□□ -1.59
COL8A2P25067 AC090236.2-201ENST00000587933 1101 ntBASIC5.13□□□□□ -1.59
COL8A2P25067 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.13□□□□□ -1.59
COL8A2P25067 AL357562.1-201ENST00000624911 609 ntBASIC5.13□□□□□ -1.59
COL8A2P25067 AL355480.1-201ENST00000629041 99 ntBASIC5.13□□□□□ -1.59
COL8A2P25067 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.13□□□□□ -1.59
COL8A2P25067 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL8A2P25067 AL359091.1-201ENST00000449048 1734 ntBASIC5.13□□□□□ -1.59
COL8A2P25067 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL8A2P25067 AL117378.2-201ENST00000622916 1337 ntBASIC5.13□□□□□ -1.59
COL8A2P25067 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL8A2P25067 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL8A2P25067 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL8A2P25067 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
COL8A2P25067 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.13□□□□□ -1.59
COL8A2P25067 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
COL8A2P25067 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL8A2P25067 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
COL8A2P25067 AC091305.2-201ENST00000624049 1576 ntBASIC5.12□□□□□ -1.59
COL8A2P25067 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
COL8A2P25067 AC079753.1-201ENST00000623243 3868 ntBASIC5.12□□□□□ -1.59
COL8A2P25067 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL8A2P25067 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL8A2P25067 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.12□□□□□ -1.59
COL8A2P25067 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
COL8A2P25067 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL8A2P25067 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.12□□□□□ -1.59
COL8A2P25067 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
COL8A2P25067 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.12□□□□□ -1.59
COL8A2P25067 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL8A2P25067 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL8A2P25067 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.12□□□□□ -1.59
COL8A2P25067 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
COL8A2P25067 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL8A2P25067 RNU105B-201ENST00000364478 208 ntBASIC5.12□□□□□ -1.59
COL8A2P25067 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.12□□□□□ -1.59
COL8A2P25067 AL096711.1-201ENST00000404780 554 ntBASIC5.12□□□□□ -1.59
COL8A2P25067 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.12□□□□□ -1.59
COL8A2P25067 RPS27AP3-201ENST00000453803 454 ntBASIC5.12□□□□□ -1.59
COL8A2P25067 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.12□□□□□ -1.59
COL8A2P25067 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.12□□□□□ -1.59
COL8A2P25067 RNA5SP271-201ENST00000516700 88 ntBASIC5.12□□□□□ -1.59
COL8A2P25067 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.12□□□□□ -1.59
COL8A2P25067 IGKV2-4-201ENST00000523070 340 ntBASIC5.12□□□□□ -1.59
COL8A2P25067 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.12□□□□□ -1.59
COL8A2P25067 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.12□□□□□ -1.59
COL8A2P25067 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.12□□□□□ -1.59
COL8A2P25067 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.12□□□□□ -1.59
COL8A2P25067 MIR3614-201ENST00000581261 86 ntBASIC5.12□□□□□ -1.59
COL8A2P25067 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.12□□□□□ -1.59
COL8A2P25067 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.12□□□□□ -1.59
COL8A2P25067 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.12□□□□□ -1.59
COL8A2P25067 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.12□□□□□ -1.59
COL8A2P25067 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.12□□□□□ -1.59
COL8A2P25067 AC091193.1-201ENST00000604640 448 ntBASIC5.12□□□□□ -1.59
COL8A2P25067 AL021368.3-201ENST00000607119 578 ntBASIC5.12□□□□□ -1.59
COL8A2P25067 MIR6809-201ENST00000612189 116 ntBASIC5.12□□□□□ -1.59
COL8A2P25067 AC026124.2-201ENST00000621847 656 ntBASIC5.12□□□□□ -1.59
COL8A2P25067 AC116667.2-201ENST00000641075 823 ntBASIC5.12□□□□□ -1.59
COL8A2P25067 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL8A2P25067 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL8A2P25067 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL8A2P25067 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
COL8A2P25067 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL8A2P25067 SNX18P3-202ENST00000565670 1750 ntBASIC5.11□□□□□ -1.59
COL8A2P25067 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
COL8A2P25067 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC5.11□□□□□ -1.59
COL8A2P25067 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL8A2P25067 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
COL8A2P25067 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL8A2P25067 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
COL8A2P25067 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.11□□□□□ -1.59
COL8A2P25067 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL8A2P25067 AL161901.1-201ENST00000624954 3425 ntBASIC5.11□□□□□ -1.59
COL8A2P25067 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.11□□□□□ -1.59
COL8A2P25067 RNA5SP510-201ENST00000364697 99 ntBASIC5.11□□□□□ -1.59
COL8A2P25067 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
COL8A2P25067 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL8A2P25067 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.11□□□□□ -1.59
COL8A2P25067 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.11□□□□□ -1.59
COL8A2P25067 RPS15AP30-201ENST00000420976 390 ntBASIC5.11□□□□□ -1.59
COL8A2P25067 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.11□□□□□ -1.59
COL8A2P25067 RPS29P14-201ENST00000431518 171 ntBASIC5.11□□□□□ -1.59
COL8A2P25067 AL355355.1-201ENST00000442900 793 ntBASIC5.11□□□□□ -1.59
COL8A2P25067 AL512593.1-201ENST00000444758 779 ntBASIC5.11□□□□□ -1.59
COL8A2P25067 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.11□□□□□ -1.59
COL8A2P25067 AL022237.1-201ENST00000446663 358 ntBASIC5.11□□□□□ -1.59
COL8A2P25067 AL445466.1-201ENST00000448432 357 ntBASIC5.11□□□□□ -1.59
COL8A2P25067 AC103563.5-201ENST00000455643 364 ntBASIC5.11□□□□□ -1.59
COL8A2P25067 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.11□□□□□ -1.59
COL8A2P25067 AC092865.4-201ENST00000477936 615 ntBASIC5.11□□□□□ -1.59
COL8A2P25067 AC060775.1-201ENST00000518241 520 ntBASIC5.11□□□□□ -1.59
COL8A2P25067 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.11□□□□□ -1.59
COL8A2P25067 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL8A2P25067 AP005639.1-201ENST00000526939 192 ntBASIC5.11□□□□□ -1.59
COL8A2P25067 AC020916.2-201ENST00000591242 360 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms