Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 U3.2-201ENST00000362981 210 ntBASIC7.77□□□□□ -1.17
COL5A2P05997 HIST1H3PS1-201ENST00000404612 417 ntBASIC7.77□□□□□ -1.17
COL5A2P05997 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC7.77□□□□□ -1.17
COL5A2P05997 RPL23AP27-201ENST00000415161 451 ntBASIC7.77□□□□□ -1.17
COL5A2P05997 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
COL5A2P05997 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC7.77□□□□□ -1.17
COL5A2P05997 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC7.77□□□□□ -1.17
COL5A2P05997 CBX1P5-201ENST00000475330 559 ntBASIC7.77□□□□□ -1.17
COL5A2P05997 SCARNA6.1-201ENST00000516989 238 ntBASIC7.77□□□□□ -1.17
COL5A2P05997 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
COL5A2P05997 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.77□□□□□ -1.17
COL5A2P05997 OR4A42P-201ENST00000531397 938 ntBASIC7.77□□□□□ -1.17
COL5A2P05997 HMGN2P6-201ENST00000551091 273 ntBASIC7.77□□□□□ -1.17
COL5A2P05997 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC7.77□□□□□ -1.17
COL5A2P05997 PPATP2-201ENST00000605635 508 ntBASIC7.77□□□□□ -1.17
COL5A2P05997 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC7.77□□□□□ -1.17
COL5A2P05997 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC7.77□□□□□ -1.17
COL5A2P05997 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL5A2P05997 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL5A2P05997 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL5A2P05997 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL5A2P05997 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL5A2P05997 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL5A2P05997 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
COL5A2P05997 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
COL5A2P05997 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
COL5A2P05997 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
COL5A2P05997 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7.77□□□□□ -1.17
COL5A2P05997 AC105749.1-201ENST00000631338 2008 ntBASIC7.77□□□□□ -1.17
COL5A2P05997 CD86-204ENST00000469710 1604 ntTSL 2 BASIC7.77□□□□□ -1.17
COL5A2P05997 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.77□□□□□ -1.17
COL5A2P05997 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
COL5A2P05997 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
COL5A2P05997 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
COL5A2P05997 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
COL5A2P05997 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL5A2P05997 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL5A2P05997 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL5A2P05997 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL5A2P05997 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL5A2P05997 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL5A2P05997 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL5A2P05997 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL5A2P05997 FAM32BP-201ENST00000344033 333 ntBASIC7.76□□□□□ -1.17
COL5A2P05997 AL159987.1-201ENST00000347911 293 ntBASIC7.76□□□□□ -1.17
COL5A2P05997 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
COL5A2P05997 METTL15P3-201ENST00000415522 1221 ntBASIC7.76□□□□□ -1.17
COL5A2P05997 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC7.76□□□□□ -1.17
COL5A2P05997 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC7.76□□□□□ -1.17
COL5A2P05997 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC7.76□□□□□ -1.17
COL5A2P05997 CYCSP12-201ENST00000437729 300 ntBASIC7.76□□□□□ -1.17
COL5A2P05997 AL663074.2-201ENST00000440621 479 ntBASIC7.76□□□□□ -1.17
COL5A2P05997 AL022237.1-201ENST00000446663 358 ntBASIC7.76□□□□□ -1.17
COL5A2P05997 BZW1P1-201ENST00000454901 1240 ntBASIC7.76□□□□□ -1.17
COL5A2P05997 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL5A2P05997 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC7.76□□□□□ -1.17
COL5A2P05997 AC092593.2-201ENST00000513866 913 ntBASIC7.76□□□□□ -1.17
COL5A2P05997 AC021146.10-201ENST00000515628 706 ntBASIC7.76□□□□□ -1.17
COL5A2P05997 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC7.76□□□□□ -1.17
COL5A2P05997 CDC42P3-201ENST00000518493 633 ntBASIC7.76□□□□□ -1.17
COL5A2P05997 ASB8-202ENST00000535055 657 ntTSL 2 BASIC7.76□□□□□ -1.17
COL5A2P05997 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC7.76□□□□□ -1.17
COL5A2P05997 AC015720.2-201ENST00000567709 334 ntBASIC7.76□□□□□ -1.17
COL5A2P05997 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.76□□□□□ -1.17
COL5A2P05997 MIR6837-201ENST00000620884 64 ntBASIC7.76□□□□□ -1.17
COL5A2P05997 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC7.76□□□□□ -1.17
COL5A2P05997 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL5A2P05997 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL5A2P05997 GTF2IP4-201ENST00000453092 2054 ntBASIC7.76□□□□□ -1.17
COL5A2P05997 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL5A2P05997 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL5A2P05997 MAPK10-323ENST00000641493 3207 ntBASIC7.76□□□□□ -1.17
COL5A2P05997 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.76□□□□□ -1.17
COL5A2P05997 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.76□□□□□ -1.17
COL5A2P05997 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL5A2P05997 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL5A2P05997 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
COL5A2P05997 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL5A2P05997 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
COL5A2P05997 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
COL5A2P05997 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC7.75□□□□□ -1.17
COL5A2P05997 AC103591.2-201ENST00000265259 766 ntBASIC7.75□□□□□ -1.17
COL5A2P05997 AC005042.1-201ENST00000393397 800 ntBASIC7.75□□□□□ -1.17
COL5A2P05997 AC009804.1-201ENST00000400949 179 ntBASIC7.75□□□□□ -1.17
COL5A2P05997 AL133173.1-201ENST00000423458 397 ntBASIC7.75□□□□□ -1.17
COL5A2P05997 AC091685.2-201ENST00000454924 864 ntBASIC7.75□□□□□ -1.17
COL5A2P05997 RPS4XP1-201ENST00000482189 787 ntBASIC7.75□□□□□ -1.17
COL5A2P05997 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC7.75□□□□□ -1.17
COL5A2P05997 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC7.75□□□□□ -1.17
COL5A2P05997 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC7.75□□□□□ -1.17
COL5A2P05997 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC7.75□□□□□ -1.17
COL5A2P05997 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
COL5A2P05997 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
COL5A2P05997 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
COL5A2P05997 AC009166.2-201ENST00000624410 2833 ntBASIC7.75□□□□□ -1.17
COL5A2P05997 SALL4P7-201ENST00000555779 3120 ntBASIC7.75□□□□□ -1.17
COL5A2P05997 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
COL5A2P05997 LPP-208ENST00000448637 5835 ntTSL 5 BASIC7.75□□□□□ -1.17
COL5A2P05997 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
COL5A2P05997 AC011379.1-201ENST00000508713 3025 ntBASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms