Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC024405.1-201ENST00000532521 1042 ntBASIC6.06□□□□□ -1.44
HLA-DQB2P05538 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 MRPS21P9-201ENST00000571150 257 ntBASIC6.06□□□□□ -1.44
HLA-DQB2P05538 AC008507.3-201ENST00000585753 472 ntBASIC6.06□□□□□ -1.44
HLA-DQB2P05538 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 MIR6809-201ENST00000612189 116 ntBASIC6.06□□□□□ -1.44
HLA-DQB2P05538 MIR7109-201ENST00000613748 65 ntBASIC6.06□□□□□ -1.44
HLA-DQB2P05538 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 AC130304.1-201ENST00000622942 2385 ntBASIC6.06□□□□□ -1.44
HLA-DQB2P05538 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.06□□□□□ -1.44
HLA-DQB2P05538 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DQB2P05538 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DQB2P05538 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DQB2P05538 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DQB2P05538 AL161756.3-201ENST00000641216 2071 ntBASIC6.05□□□□□ -1.44
HLA-DQB2P05538 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.05□□□□□ -1.44
HLA-DQB2P05538 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
HLA-DQB2P05538 RNFT1P3-201ENST00000340898 1052 ntBASIC6.05□□□□□ -1.44
HLA-DQB2P05538 RPS26P38-201ENST00000414476 348 ntBASIC6.05□□□□□ -1.44
HLA-DQB2P05538 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.05□□□□□ -1.44
HLA-DQB2P05538 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.05□□□□□ -1.44
HLA-DQB2P05538 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.05□□□□□ -1.44
HLA-DQB2P05538 KIF4CP-201ENST00000422742 1279 ntBASIC6.05□□□□□ -1.44
HLA-DQB2P05538 RPS3AP38-201ENST00000435889 763 ntBASIC6.05□□□□□ -1.44
HLA-DQB2P05538 RPS12P17-201ENST00000438591 377 ntBASIC6.05□□□□□ -1.44
HLA-DQB2P05538 AC005077.1-201ENST00000449226 375 ntBASIC6.05□□□□□ -1.44
HLA-DQB2P05538 CST12P-201ENST00000457644 362 ntBASIC6.05□□□□□ -1.44
HLA-DQB2P05538 AC023245.1-201ENST00000468501 517 ntBASIC6.05□□□□□ -1.44
HLA-DQB2P05538 RPL38P3-201ENST00000484463 213 ntBASIC6.05□□□□□ -1.44
HLA-DQB2P05538 RN7SL170P-201ENST00000487098 295 ntBASIC6.05□□□□□ -1.44
HLA-DQB2P05538 TOMM22P4-201ENST00000511318 336 ntBASIC6.05□□□□□ -1.44
HLA-DQB2P05538 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.05□□□□□ -1.44
HLA-DQB2P05538 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.05□□□□□ -1.44
HLA-DQB2P05538 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.05□□□□□ -1.44
HLA-DQB2P05538 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.05□□□□□ -1.44
HLA-DQB2P05538 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.05□□□□□ -1.44
HLA-DQB2P05538 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.05□□□□□ -1.44
HLA-DQB2P05538 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC6.05□□□□□ -1.44
HLA-DQB2P05538 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.05□□□□□ -1.44
HLA-DQB2P05538 AL355974.3-201ENST00000617383 467 ntBASIC6.05□□□□□ -1.44
HLA-DQB2P05538 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.05□□□□□ -1.44
HLA-DQB2P05538 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.05□□□□□ -1.44
HLA-DQB2P05538 IFIT1P1-201ENST00000400497 1449 ntBASIC6.05□□□□□ -1.44
HLA-DQB2P05538 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
HLA-DQB2P05538 AC005224.3-201ENST00000584683 2140 ntBASIC6.05□□□□□ -1.44
HLA-DQB2P05538 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
HLA-DQB2P05538 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DQB2P05538 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HLA-DQB2P05538 IMMTP1-201ENST00000435590 2219 ntBASIC6.05□□□□□ -1.44
HLA-DQB2P05538 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DQB2P05538 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DQB2P05538 QRSL1P1-201ENST00000400977 1540 ntBASIC6.04□□□□□ -1.44
HLA-DQB2P05538 LYARP1-201ENST00000436977 1501 ntBASIC6.04□□□□□ -1.44
HLA-DQB2P05538 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DQB2P05538 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
HLA-DQB2P05538 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.04□□□□□ -1.44
HLA-DQB2P05538 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
HLA-DQB2P05538 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DQB2P05538 SELENOWP1-201ENST00000322792 252 ntBASIC6.04□□□□□ -1.44
HLA-DQB2P05538 AC107977.1-201ENST00000355745 939 ntBASIC6.04□□□□□ -1.44
HLA-DQB2P05538 SNORD1C-201ENST00000363315 78 ntBASIC6.04□□□□□ -1.44
HLA-DQB2P05538 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.04□□□□□ -1.44
HLA-DQB2P05538 SNORA70.9-201ENST00000384370 135 ntBASIC6.04□□□□□ -1.44
HLA-DQB2P05538 AL390879.1-201ENST00000439143 386 ntBASIC6.04□□□□□ -1.44
HLA-DQB2P05538 H3F3BP1-201ENST00000440551 403 ntBASIC6.04□□□□□ -1.44
HLA-DQB2P05538 AL663074.2-201ENST00000440621 479 ntBASIC6.04□□□□□ -1.44
HLA-DQB2P05538 BMS1P10-201ENST00000443754 1120 ntBASIC6.04□□□□□ -1.44
HLA-DQB2P05538 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.04□□□□□ -1.44
HLA-DQB2P05538 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DQB2P05538 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.04□□□□□ -1.44
HLA-DQB2P05538 AC019084.1-201ENST00000457337 432 ntBASIC6.04□□□□□ -1.44
HLA-DQB2P05538 AC092865.4-201ENST00000477936 615 ntBASIC6.04□□□□□ -1.44
HLA-DQB2P05538 TRBV5-2-201ENST00000489095 273 ntBASIC6.04□□□□□ -1.44
HLA-DQB2P05538 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.04□□□□□ -1.44
HLA-DQB2P05538 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.04□□□□□ -1.44
HLA-DQB2P05538 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC6.04□□□□□ -1.44
HLA-DQB2P05538 RPA2P1-201ENST00000556557 721 ntBASIC6.04□□□□□ -1.44
HLA-DQB2P05538 AC107958.1-201ENST00000556576 290 ntBASIC6.04□□□□□ -1.44
HLA-DQB2P05538 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DQB2P05538 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.04□□□□□ -1.44
HLA-DQB2P05538 AC108673.3-201ENST00000609183 335 ntBASIC6.04□□□□□ -1.44
HLA-DQB2P05538 AC073593.1-201ENST00000624500 411 ntBASIC6.04□□□□□ -1.44
HLA-DQB2P05538 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HLA-DQB2P05538 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms