Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
SPTA1P02549 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC5.59□□□□□ -1.52
SPTA1P02549 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
SPTA1P02549 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
SPTA1P02549 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
SPTA1P02549 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC5.59□□□□□ -1.52
SPTA1P02549 ARHGAP42P5-201ENST00000548856 2936 ntBASIC5.59□□□□□ -1.52
SPTA1P02549 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
SPTA1P02549 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SPTA1P02549 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC5.58□□□□□ -1.52
SPTA1P02549 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SPTA1P02549 SNORA64.1-201ENST00000362600 132 ntBASIC5.58□□□□□ -1.52
SPTA1P02549 AC016739.1-201ENST00000405359 345 ntBASIC5.58□□□□□ -1.52
SPTA1P02549 ERMN-202ENST00000409216 746 ntTSL 4 BASIC5.58□□□□□ -1.52
SPTA1P02549 AC245096.1-201ENST00000413104 546 ntBASIC5.58□□□□□ -1.52
SPTA1P02549 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.58□□□□□ -1.52
SPTA1P02549 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
SPTA1P02549 AC007686.1-201ENST00000488511 463 ntBASIC5.58□□□□□ -1.52
SPTA1P02549 RPL15P21-201ENST00000495592 567 ntBASIC5.58□□□□□ -1.52
SPTA1P02549 SNORA58-201ENST00000505219 137 ntBASIC5.58□□□□□ -1.52
SPTA1P02549 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.58□□□□□ -1.52
SPTA1P02549 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.58□□□□□ -1.52
SPTA1P02549 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.58□□□□□ -1.52
SPTA1P02549 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.58□□□□□ -1.52
SPTA1P02549 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SPTA1P02549 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC5.58□□□□□ -1.52
SPTA1P02549 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SPTA1P02549 Z93929.1-201ENST00000418200 1475 ntBASIC5.58□□□□□ -1.52
SPTA1P02549 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SPTA1P02549 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
SPTA1P02549 AL139805.2-201ENST00000455305 2433 ntBASIC5.58□□□□□ -1.52
SPTA1P02549 RPL17P50-201ENST00000396131 546 ntBASIC5.58□□□□□ -1.52
SPTA1P02549 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.58□□□□□ -1.52
SPTA1P02549 AC098847.1-201ENST00000473094 348 ntBASIC5.58□□□□□ -1.52
SPTA1P02549 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.58□□□□□ -1.52
SPTA1P02549 AC021269.1-201ENST00000526860 705 ntBASIC5.58□□□□□ -1.52
SPTA1P02549 TOMM20P2-201ENST00000540082 421 ntBASIC5.58□□□□□ -1.52
SPTA1P02549 BUB1P1-201ENST00000603541 607 ntBASIC5.58□□□□□ -1.52
SPTA1P02549 AL512329.2-201ENST00000607350 548 ntBASIC5.58□□□□□ -1.52
SPTA1P02549 AL008723.3-201ENST00000608926 449 ntBASIC5.58□□□□□ -1.52
SPTA1P02549 AL445670.1-201ENST00000618889 801 ntBASIC5.58□□□□□ -1.52
SPTA1P02549 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.58□□□□□ -1.52
SPTA1P02549 MROH3P-201ENST00000435735 2676 ntBASIC5.58□□□□□ -1.52
SPTA1P02549 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC5.58□□□□□ -1.52
SPTA1P02549 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SPTA1P02549 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SPTA1P02549 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SPTA1P02549 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.58□□□□□ -1.52
SPTA1P02549 ZSWIM5P3-201ENST00000511265 2743 ntBASIC5.58□□□□□ -1.52
SPTA1P02549 CAST-204ENST00000341926 2487 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SPTA1P02549 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC5.58□□□□□ -1.52
SPTA1P02549 AC026464.2-201ENST00000567834 2421 ntBASIC5.58□□□□□ -1.52
SPTA1P02549 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SPTA1P02549 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SPTA1P02549 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SPTA1P02549 USP13-203ENST00000496897 2747 ntTSL 2 BASIC5.57□□□□□ -1.52
SPTA1P02549 CTNNA1P1-201ENST00000515849 2728 ntBASIC5.57□□□□□ -1.52
SPTA1P02549 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SPTA1P02549 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SPTA1P02549 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
SPTA1P02549 NRIR-201ENST00000366140 799 ntTSL 3 BASIC5.57□□□□□ -1.52
SPTA1P02549 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.57□□□□□ -1.52
SPTA1P02549 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.57□□□□□ -1.52
SPTA1P02549 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.57□□□□□ -1.52
SPTA1P02549 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.57□□□□□ -1.52
SPTA1P02549 AC002553.3-201ENST00000453002 341 ntBASIC5.57□□□□□ -1.52
SPTA1P02549 RPS17P15-201ENST00000475609 349 ntBASIC5.57□□□□□ -1.52
SPTA1P02549 RN7SL583P-201ENST00000475692 287 ntBASIC5.57□□□□□ -1.52
SPTA1P02549 IGHV3-57-201ENST00000520143 280 ntBASIC5.57□□□□□ -1.52
SPTA1P02549 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC5.57□□□□□ -1.52
SPTA1P02549 WBP1LP3-201ENST00000523033 208 ntBASIC5.57□□□□□ -1.52
SPTA1P02549 AP004607.2-201ENST00000533949 322 ntBASIC5.57□□□□□ -1.52
SPTA1P02549 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.57□□□□□ -1.52
SPTA1P02549 FAM27E4-201ENST00000605259 342 ntBASIC5.57□□□□□ -1.52
SPTA1P02549 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
SPTA1P02549 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC5.57□□□□□ -1.52
SPTA1P02549 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SPTA1P02549 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SPTA1P02549 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
SPTA1P02549 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SPTA1P02549 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SPTA1P02549 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SPTA1P02549 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC5.57□□□□□ -1.52
SPTA1P02549 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
SPTA1P02549 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.57□□□□□ -1.52
SPTA1P02549 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
SPTA1P02549 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
SPTA1P02549 AL590762.4-201ENST00000425885 253 ntBASIC5.57□□□□□ -1.52
SPTA1P02549 Z68868.1-201ENST00000429048 544 ntBASIC5.57□□□□□ -1.52
SPTA1P02549 PSMD10P3-201ENST00000437000 448 ntBASIC5.57□□□□□ -1.52
SPTA1P02549 ZNF619P1-201ENST00000446539 752 ntBASIC5.57□□□□□ -1.52
SPTA1P02549 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.57□□□□□ -1.52
SPTA1P02549 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.57□□□□□ -1.52
SPTA1P02549 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.57□□□□□ -1.52
SPTA1P02549 OR7A1P-201ENST00000601206 970 ntBASIC5.57□□□□□ -1.52
SPTA1P02549 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SPTA1P02549 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SPTA1P02549 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SPTA1P02549 ZNF410-205ENST00000442160 2076 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SPTA1P02549 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms