Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AP003108.4-201ENST00000623917 878 ntBASIC4.54□□□□□ -1.68
HLA-DQA1P01909 AC005355.2-201ENST00000625064 484 ntBASIC4.54□□□□□ -1.68
HLA-DQA1P01909 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 AC003985.2-201ENST00000562268 1669 ntBASIC4.54□□□□□ -1.68
HLA-DQA1P01909 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 AC010266.2-201ENST00000564741 3255 ntBASIC4.54□□□□□ -1.68
HLA-DQA1P01909 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DQA1P01909 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 AC139426.3-201ENST00000605648 2059 ntBASIC4.53□□□□□ -1.68
HLA-DQA1P01909 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 LRRC37A15P-201ENST00000514785 1355 ntBASIC4.53□□□□□ -1.68
HLA-DQA1P01909 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 AC016583.1-201ENST00000624221 2431 ntBASIC4.53□□□□□ -1.68
HLA-DQA1P01909 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 MIR99A-201ENST00000384906 81 ntBASIC4.53□□□□□ -1.68
HLA-DQA1P01909 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 RN7SKP166-201ENST00000410812 305 ntBASIC4.53□□□□□ -1.68
HLA-DQA1P01909 RN7SKP279-201ENST00000411383 298 ntBASIC4.53□□□□□ -1.68
HLA-DQA1P01909 AL139135.1-201ENST00000412675 209 ntBASIC4.53□□□□□ -1.68
HLA-DQA1P01909 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 AL121878.1-201ENST00000418638 859 ntBASIC4.53□□□□□ -1.68
HLA-DQA1P01909 YWHAZP5-201ENST00000419975 730 ntBASIC4.53□□□□□ -1.68
HLA-DQA1P01909 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 RPL3P11-201ENST00000434028 1146 ntBASIC4.53□□□□□ -1.68
HLA-DQA1P01909 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 AL356133.1-201ENST00000444762 372 ntBASIC4.53□□□□□ -1.68
HLA-DQA1P01909 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 RN7SL37P-201ENST00000490461 307 ntBASIC4.53□□□□□ -1.68
HLA-DQA1P01909 B3GNTL1P1-201ENST00000509174 289 ntBASIC4.53□□□□□ -1.68
HLA-DQA1P01909 OSTC-204ENST00000512478 663 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 AC096661.1-201ENST00000515870 822 ntBASIC4.53□□□□□ -1.68
HLA-DQA1P01909 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 AL132640.1-201ENST00000559594 619 ntBASIC4.53□□□□□ -1.68
HLA-DQA1P01909 AC007346.2-201ENST00000564816 892 ntBASIC4.53□□□□□ -1.68
HLA-DQA1P01909 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 DYNLL1P1-201ENST00000595442 269 ntBASIC4.53□□□□□ -1.68
HLA-DQA1P01909 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 AC091133.5-201ENST00000603088 301 ntBASIC4.53□□□□□ -1.68
HLA-DQA1P01909 DIMT1P1-201ENST00000603970 763 ntBASIC4.53□□□□□ -1.68
HLA-DQA1P01909 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 AL133481.2-203ENST00000607558 139 ntBASIC4.53□□□□□ -1.68
HLA-DQA1P01909 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 AC008833.1-201ENST00000611633 691 ntBASIC4.53□□□□□ -1.68
HLA-DQA1P01909 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 MIR7854-201ENST00000620068 65 ntBASIC4.53□□□□□ -1.68
HLA-DQA1P01909 AC010809.3-201ENST00000621310 641 ntBASIC4.53□□□□□ -1.68
HLA-DQA1P01909 AL138693.1-201ENST00000622219 129 ntBASIC4.53□□□□□ -1.68
HLA-DQA1P01909 AC006328.2-201ENST00000623198 397 ntBASIC4.53□□□□□ -1.68
HLA-DQA1P01909 AC012005.2-201ENST00000624333 397 ntBASIC4.53□□□□□ -1.68
HLA-DQA1P01909 AL035425.4-201ENST00000624509 1063 ntBASIC4.53□□□□□ -1.68
HLA-DQA1P01909 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DQA1P01909 AC022306.1-201ENST00000560489 1562 ntBASIC4.53□□□□□ -1.69
HLA-DQA1P01909 AC092376.2-201ENST00000622621 4116 ntBASIC4.53□□□□□ -1.69
HLA-DQA1P01909 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 AC006600.2-201ENST00000624834 2506 ntBASIC4.52□□□□□ -1.69
HLA-DQA1P01909 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DQA1P01909 PSMC1P6-201ENST00000477233 1319 ntBASIC4.52□□□□□ -1.69
HLA-DQA1P01909 PSMC1P4-201ENST00000515236 1327 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms