Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC027088.4-201ENST00000611559 1947 ntBASIC6.27□□□□□ -1.41
PDGFBP01127 CDY11P-201ENST00000447168 1651 ntBASIC6.26□□□□□ -1.41
PDGFBP01127 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.26□□□□□ -1.41
PDGFBP01127 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PDGFBP01127 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PDGFBP01127 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.26□□□□□ -1.41
PDGFBP01127 AC119674.1-202ENST00000641333 1860 ntBASIC6.26□□□□□ -1.41
PDGFBP01127 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
PDGFBP01127 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
PDGFBP01127 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
PDGFBP01127 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PDGFBP01127 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
PDGFBP01127 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
PDGFBP01127 ERMN-202ENST00000409216 746 ntTSL 4 BASIC6.26□□□□□ -1.41
PDGFBP01127 RPS21P8-201ENST00000413365 247 ntBASIC6.26□□□□□ -1.41
PDGFBP01127 RPA2P2-201ENST00000419698 796 ntBASIC6.26□□□□□ -1.41
PDGFBP01127 AC245884.2-201ENST00000426257 404 ntBASIC6.26□□□□□ -1.41
PDGFBP01127 AC009237.1-201ENST00000442127 744 ntBASIC6.26□□□□□ -1.41
PDGFBP01127 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.26□□□□□ -1.41
PDGFBP01127 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC6.26□□□□□ -1.41
PDGFBP01127 AC112184.1-201ENST00000505179 312 ntBASIC6.26□□□□□ -1.41
PDGFBP01127 AC112225.1-201ENST00000508230 297 ntBASIC6.26□□□□□ -1.41
PDGFBP01127 AC138866.2-201ENST00000508650 584 ntBASIC6.26□□□□□ -1.41
PDGFBP01127 AC109481.1-201ENST00000509173 282 ntBASIC6.26□□□□□ -1.41
PDGFBP01127 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PDGFBP01127 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.26□□□□□ -1.41
PDGFBP01127 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC6.26□□□□□ -1.41
PDGFBP01127 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.26□□□□□ -1.41
PDGFBP01127 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC6.26□□□□□ -1.41
PDGFBP01127 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC6.26□□□□□ -1.41
PDGFBP01127 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.26□□□□□ -1.41
PDGFBP01127 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.26□□□□□ -1.41
PDGFBP01127 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.26□□□□□ -1.41
PDGFBP01127 IMMP1LP3-201ENST00000604197 224 ntBASIC6.26□□□□□ -1.41
PDGFBP01127 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.26□□□□□ -1.41
PDGFBP01127 TSHZ2-205ENST00000626626 670 ntBASIC6.26□□□□□ -1.41
PDGFBP01127 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.26□□□□□ -1.41
PDGFBP01127 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.26□□□□□ -1.41
PDGFBP01127 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC6.26□□□□□ -1.41
PDGFBP01127 SAMMSON-227ENST00000642114 1199 ntBASIC6.26□□□□□ -1.41
PDGFBP01127 MFSD8-217ENST00000641178 4374 ntBASIC6.26□□□□□ -1.41
PDGFBP01127 MAPK10-383ENST00000642032 3390 ntBASIC6.26□□□□□ -1.41
PDGFBP01127 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.26□□□□□ -1.41
PDGFBP01127 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
PDGFBP01127 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PDGFBP01127 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.26□□□□□ -1.41
PDGFBP01127 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PDGFBP01127 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.26□□□□□ -1.41
PDGFBP01127 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PDGFBP01127 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PDGFBP01127 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.26□□□□□ -1.41
PDGFBP01127 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PDGFBP01127 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PDGFBP01127 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
PDGFBP01127 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
PDGFBP01127 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDGFBP01127 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.25□□□□□ -1.41
PDGFBP01127 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC6.25□□□□□ -1.41
PDGFBP01127 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDGFBP01127 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PDGFBP01127 AC092821.2-201ENST00000545710 2042 ntBASIC6.25□□□□□ -1.41
PDGFBP01127 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.25□□□□□ -1.41
PDGFBP01127 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDGFBP01127 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDGFBP01127 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PDGFBP01127 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.25□□□□□ -1.41
PDGFBP01127 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDGFBP01127 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.25□□□□□ -1.41
PDGFBP01127 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PDGFBP01127 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
PDGFBP01127 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDGFBP01127 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDGFBP01127 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDGFBP01127 HMGB1P20-201ENST00000402555 677 ntBASIC6.25□□□□□ -1.41
PDGFBP01127 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.25□□□□□ -1.41
PDGFBP01127 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.25□□□□□ -1.41
PDGFBP01127 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.25□□□□□ -1.41
PDGFBP01127 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.25□□□□□ -1.41
PDGFBP01127 RPS7P8-201ENST00000418311 581 ntBASIC6.25□□□□□ -1.41
PDGFBP01127 AC127526.2-201ENST00000426436 775 ntBASIC6.25□□□□□ -1.41
PDGFBP01127 EEF1B2P6-201ENST00000445713 673 ntBASIC6.25□□□□□ -1.41
PDGFBP01127 AL445466.1-201ENST00000448432 357 ntBASIC6.25□□□□□ -1.41
PDGFBP01127 AL606490.1-201ENST00000452266 765 ntBASIC6.25□□□□□ -1.41
PDGFBP01127 AC011225.1-201ENST00000457751 369 ntBASIC6.25□□□□□ -1.41
PDGFBP01127 RN7SL269P-201ENST00000467795 305 ntBASIC6.25□□□□□ -1.41
PDGFBP01127 AC026254.2-201ENST00000475295 371 ntBASIC6.25□□□□□ -1.41
PDGFBP01127 AC092865.4-201ENST00000477936 615 ntBASIC6.25□□□□□ -1.41
PDGFBP01127 BX510359.5-201ENST00000515651 304 ntBASIC6.25□□□□□ -1.41
PDGFBP01127 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.25□□□□□ -1.41
PDGFBP01127 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.25□□□□□ -1.41
PDGFBP01127 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.25□□□□□ -1.41
PDGFBP01127 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.25□□□□□ -1.41
PDGFBP01127 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.25□□□□□ -1.41
PDGFBP01127 AC015849.6-201ENST00000605454 474 ntBASIC6.25□□□□□ -1.41
PDGFBP01127 AL157762.1-201ENST00000619612 415 ntBASIC6.25□□□□□ -1.41
PDGFBP01127 MIR7159-201ENST00000620587 66 ntBASIC6.25□□□□□ -1.41
PDGFBP01127 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.25□□□□□ -1.41
PDGFBP01127 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PDGFBP01127 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PDGFBP01127 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms