Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.78□□□□□ -1.48
NKX2-2O95096 AC074029.2-201ENST00000551045 634 ntBASIC5.78□□□□□ -1.48
NKX2-2O95096 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.78□□□□□ -1.48
NKX2-2O95096 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.78□□□□□ -1.48
NKX2-2O95096 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.78□□□□□ -1.48
NKX2-2O95096 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.78□□□□□ -1.48
NKX2-2O95096 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.78□□□□□ -1.48
NKX2-2O95096 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.78□□□□□ -1.48
NKX2-2O95096 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.78□□□□□ -1.48
NKX2-2O95096 OR51C1P-201ENST00000608504 942 ntBASIC5.78□□□□□ -1.48
NKX2-2O95096 HTR1DP1-201ENST00000616500 888 ntBASIC5.78□□□□□ -1.48
NKX2-2O95096 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.78□□□□□ -1.48
NKX2-2O95096 AP003400.6-201ENST00000624698 740 ntBASIC5.78□□□□□ -1.48
NKX2-2O95096 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.78□□□□□ -1.48
NKX2-2O95096 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.78□□□□□ -1.48
NKX2-2O95096 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.78□□□□□ -1.48
NKX2-2O95096 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
NKX2-2O95096 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.78□□□□□ -1.48
NKX2-2O95096 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NKX2-2O95096 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
NKX2-2O95096 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.48
NKX2-2O95096 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.48
NKX2-2O95096 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NKX2-2O95096 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NKX2-2O95096 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
NKX2-2O95096 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NKX2-2O95096 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NKX2-2O95096 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NKX2-2O95096 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.77□□□□□ -1.49
NKX2-2O95096 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NKX2-2O95096 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
NKX2-2O95096 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
NKX2-2O95096 AC073342.2-201ENST00000595842 1800 ntBASIC5.77□□□□□ -1.49
NKX2-2O95096 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.77□□□□□ -1.49
NKX2-2O95096 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NKX2-2O95096 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
NKX2-2O95096 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.77□□□□□ -1.49
NKX2-2O95096 RNA5SP346-201ENST00000363541 121 ntBASIC5.77□□□□□ -1.49
NKX2-2O95096 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
NKX2-2O95096 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NKX2-2O95096 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NKX2-2O95096 PSMA6P1-201ENST00000400275 741 ntBASIC5.77□□□□□ -1.49
NKX2-2O95096 AL139805.1-201ENST00000407837 289 ntBASIC5.77□□□□□ -1.49
NKX2-2O95096 RN7SKP146-201ENST00000410242 334 ntBASIC5.77□□□□□ -1.49
NKX2-2O95096 RNA5SP198-201ENST00000410376 127 ntBASIC5.77□□□□□ -1.49
NKX2-2O95096 RNA5SP251-201ENST00000410614 137 ntBASIC5.77□□□□□ -1.49
NKX2-2O95096 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.77□□□□□ -1.49
NKX2-2O95096 FAR1P1-201ENST00000427163 934 ntBASIC5.77□□□□□ -1.49
NKX2-2O95096 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.77□□□□□ -1.49
NKX2-2O95096 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.77□□□□□ -1.49
NKX2-2O95096 LINC00328-2P-201ENST00000436585 219 ntBASIC5.77□□□□□ -1.49
NKX2-2O95096 ARL5AP3-201ENST00000439327 386 ntBASIC5.77□□□□□ -1.49
NKX2-2O95096 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.77□□□□□ -1.49
NKX2-2O95096 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.77□□□□□ -1.49
NKX2-2O95096 MTND5P8-201ENST00000449817 1083 ntBASIC5.77□□□□□ -1.49
NKX2-2O95096 KF459542.1-201ENST00000450908 553 ntBASIC5.77□□□□□ -1.49
NKX2-2O95096 AL133351.3-201ENST00000454998 193 ntBASIC5.77□□□□□ -1.49
NKX2-2O95096 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.77□□□□□ -1.49
NKX2-2O95096 AC105420.1-201ENST00000504389 582 ntBASIC5.77□□□□□ -1.49
NKX2-2O95096 SNX18P24-201ENST00000505249 671 ntBASIC5.77□□□□□ -1.49
NKX2-2O95096 HMGN1P16-201ENST00000508308 283 ntBASIC5.77□□□□□ -1.49
NKX2-2O95096 RNU6-491P-201ENST00000516099 110 ntBASIC5.77□□□□□ -1.49
NKX2-2O95096 OR5D2P-201ENST00000524390 911 ntBASIC5.77□□□□□ -1.49
NKX2-2O95096 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.77□□□□□ -1.49
NKX2-2O95096 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.77□□□□□ -1.49
NKX2-2O95096 AC005632.2-201ENST00000564271 828 ntBASIC5.77□□□□□ -1.49
NKX2-2O95096 MT1CP-201ENST00000567054 174 ntBASIC5.77□□□□□ -1.49
NKX2-2O95096 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.77□□□□□ -1.49
NKX2-2O95096 MIR744-201ENST00000578242 98 ntBASIC5.77□□□□□ -1.49
NKX2-2O95096 ARGFXP2-201ENST00000579304 949 ntBASIC5.77□□□□□ -1.49
NKX2-2O95096 AC005479.3-201ENST00000602790 431 ntBASIC5.77□□□□□ -1.49
NKX2-2O95096 AC012676.3-201ENST00000614983 479 ntBASIC5.77□□□□□ -1.49
NKX2-2O95096 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.77□□□□□ -1.49
NKX2-2O95096 AC103798.2-201ENST00000624292 632 ntBASIC5.77□□□□□ -1.49
NKX2-2O95096 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.77□□□□□ -1.49
NKX2-2O95096 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.77□□□□□ -1.49
NKX2-2O95096 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.77□□□□□ -1.49
NKX2-2O95096 AC010325.3-201ENST00000641084 394 ntBASIC5.77□□□□□ -1.49
NKX2-2O95096 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NKX2-2O95096 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
NKX2-2O95096 AKAP17BP-201ENST00000431706 2719 ntBASIC5.77□□□□□ -1.49
NKX2-2O95096 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.77□□□□□ -1.49
NKX2-2O95096 AC007114.2-201ENST00000576014 4281 ntBASIC5.77□□□□□ -1.49
NKX2-2O95096 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
NKX2-2O95096 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
NKX2-2O95096 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.77□□□□□ -1.49
NKX2-2O95096 AL133243.2-201ENST00000610331 1621 ntBASIC5.77□□□□□ -1.49
NKX2-2O95096 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.77□□□□□ -1.49
NKX2-2O95096 AL359091.1-201ENST00000449048 1734 ntBASIC5.77□□□□□ -1.49
NKX2-2O95096 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NKX2-2O95096 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.76□□□□□ -1.49
NKX2-2O95096 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NKX2-2O95096 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.76□□□□□ -1.49
NKX2-2O95096 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.76□□□□□ -1.49
NKX2-2O95096 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.76□□□□□ -1.49
NKX2-2O95096 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
NKX2-2O95096 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NKX2-2O95096 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
NKX2-2O95096 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NKX2-2O95096 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 156.8 ms