Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.87□□□□□ -1.47
SNX3O60493 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
SNX3O60493 AC007342.9-201ENST00000623877 1385 ntBASIC5.87□□□□□ -1.47
SNX3O60493 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.87□□□□□ -1.47
SNX3O60493 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SNX3O60493 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SNX3O60493 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.87□□□□□ -1.47
SNX3O60493 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNX3O60493 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNX3O60493 AC007938.2-201ENST00000604666 2634 ntBASIC5.87□□□□□ -1.47
SNX3O60493 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNX3O60493 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.87□□□□□ -1.47
SNX3O60493 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SNX3O60493 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SNX3O60493 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
SNX3O60493 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SNX3O60493 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.86□□□□□ -1.47
SNX3O60493 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SNX3O60493 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SNX3O60493 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.86□□□□□ -1.47
SNX3O60493 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.86□□□□□ -1.47
SNX3O60493 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.86□□□□□ -1.47
SNX3O60493 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SNX3O60493 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SNX3O60493 TUBBP10-201ENST00000427668 1301 ntBASIC5.86□□□□□ -1.47
SNX3O60493 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.86□□□□□ -1.47
SNX3O60493 RNU105B-201ENST00000364478 208 ntBASIC5.86□□□□□ -1.47
SNX3O60493 RNU1-84P-201ENST00000365447 164 ntBASIC5.86□□□□□ -1.47
SNX3O60493 SNORA70.6-201ENST00000383934 134 ntBASIC5.86□□□□□ -1.47
SNX3O60493 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
SNX3O60493 SNORA11D-201ENST00000408548 128 ntBASIC5.86□□□□□ -1.47
SNX3O60493 SNORA11E-201ENST00000408778 128 ntBASIC5.86□□□□□ -1.47
SNX3O60493 RPS20P25-201ENST00000412447 352 ntBASIC5.86□□□□□ -1.47
SNX3O60493 RPS15AP30-201ENST00000420976 390 ntBASIC5.86□□□□□ -1.47
SNX3O60493 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.86□□□□□ -1.47
SNX3O60493 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC5.86□□□□□ -1.47
SNX3O60493 KATNBL1P2-201ENST00000433311 835 ntBASIC5.86□□□□□ -1.47
SNX3O60493 AC096775.1-201ENST00000437724 448 ntBASIC5.86□□□□□ -1.47
SNX3O60493 COL11A2P1-205ENST00000441798 676 ntBASIC5.86□□□□□ -1.47
SNX3O60493 RN7SL456P-201ENST00000469290 295 ntBASIC5.86□□□□□ -1.47
SNX3O60493 AC090589.1-201ENST00000473109 362 ntBASIC5.86□□□□□ -1.47
SNX3O60493 RPL38P3-201ENST00000484463 213 ntBASIC5.86□□□□□ -1.47
SNX3O60493 AC113398.2-201ENST00000507630 558 ntBASIC5.86□□□□□ -1.47
SNX3O60493 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.86□□□□□ -1.47
SNX3O60493 AC139713.1-202ENST00000512366 460 ntBASIC5.86□□□□□ -1.47
SNX3O60493 RNU6-751P-201ENST00000516382 101 ntBASIC5.86□□□□□ -1.47
SNX3O60493 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.86□□□□□ -1.47
SNX3O60493 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.86□□□□□ -1.47
SNX3O60493 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.86□□□□□ -1.47
SNX3O60493 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC5.86□□□□□ -1.47
SNX3O60493 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.86□□□□□ -1.47
SNX3O60493 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC5.86□□□□□ -1.47
SNX3O60493 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.86□□□□□ -1.47
SNX3O60493 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.86□□□□□ -1.47
SNX3O60493 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.86□□□□□ -1.47
SNX3O60493 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.86□□□□□ -1.47
SNX3O60493 RPL29P33-201ENST00000587474 316 ntBASIC5.86□□□□□ -1.47
SNX3O60493 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.86□□□□□ -1.47
SNX3O60493 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.86□□□□□ -1.47
SNX3O60493 MIR6762-201ENST00000613340 86 ntBASIC5.86□□□□□ -1.47
SNX3O60493 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SNX3O60493 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SNX3O60493 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SNX3O60493 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SNX3O60493 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SNX3O60493 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
SNX3O60493 AC139426.3-201ENST00000605648 2059 ntBASIC5.86□□□□□ -1.47
SNX3O60493 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.85□□□□□ -1.47
SNX3O60493 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SNX3O60493 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SNX3O60493 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
SNX3O60493 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
SNX3O60493 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.85□□□□□ -1.47
SNX3O60493 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.85□□□□□ -1.47
SNX3O60493 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
SNX3O60493 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SNX3O60493 RNA5SP301-201ENST00000362537 121 ntBASIC5.85□□□□□ -1.47
SNX3O60493 AC240504.1-201ENST00000395709 845 ntBASIC5.85□□□□□ -1.47
SNX3O60493 TRGV7-201ENST00000427089 353 ntBASIC5.85□□□□□ -1.47
SNX3O60493 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC5.85□□□□□ -1.47
SNX3O60493 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.85□□□□□ -1.47
SNX3O60493 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.85□□□□□ -1.47
SNX3O60493 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.85□□□□□ -1.47
SNX3O60493 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.85□□□□□ -1.47
SNX3O60493 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.85□□□□□ -1.47
SNX3O60493 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC5.85□□□□□ -1.47
SNX3O60493 RPL12P31-201ENST00000478433 450 ntBASIC5.85□□□□□ -1.47
SNX3O60493 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC5.85□□□□□ -1.47
SNX3O60493 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC5.85□□□□□ -1.47
SNX3O60493 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.85□□□□□ -1.47
SNX3O60493 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.85□□□□□ -1.47
SNX3O60493 IGHVII-51-2-201ENST00000519778 259 ntBASIC5.85□□□□□ -1.47
SNX3O60493 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC5.85□□□□□ -1.47
SNX3O60493 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.85□□□□□ -1.47
SNX3O60493 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.85□□□□□ -1.47
SNX3O60493 SYPL1P2-201ENST00000582878 727 ntBASIC5.85□□□□□ -1.47
SNX3O60493 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.85□□□□□ -1.47
SNX3O60493 EXOSC3P2-201ENST00000594464 497 ntBASIC5.85□□□□□ -1.47
SNX3O60493 AC125494.2-201ENST00000602431 657 ntBASIC5.85□□□□□ -1.47
SNX3O60493 AL137000.1-201ENST00000610528 1244 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms