Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC4.8□□□□□ -1.64
SSSCA1O60232 RPL38P3-201ENST00000484463 213 ntBASIC4.8□□□□□ -1.64
SSSCA1O60232 AC105420.1-201ENST00000504389 582 ntBASIC4.8□□□□□ -1.64
SSSCA1O60232 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.8□□□□□ -1.64
SSSCA1O60232 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC4.8□□□□□ -1.64
SSSCA1O60232 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC4.8□□□□□ -1.64
SSSCA1O60232 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC4.8□□□□□ -1.64
SSSCA1O60232 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC4.8□□□□□ -1.64
SSSCA1O60232 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC4.8□□□□□ -1.64
SSSCA1O60232 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC4.8□□□□□ -1.64
SSSCA1O60232 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC4.8□□□□□ -1.64
SSSCA1O60232 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC4.8□□□□□ -1.64
SSSCA1O60232 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC4.8□□□□□ -1.64
SSSCA1O60232 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.8□□□□□ -1.64
SSSCA1O60232 MIR4258-201ENST00000580920 91 ntBASIC4.8□□□□□ -1.64
SSSCA1O60232 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC4.8□□□□□ -1.64
SSSCA1O60232 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC4.8□□□□□ -1.64
SSSCA1O60232 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC4.8□□□□□ -1.64
SSSCA1O60232 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.8□□□□□ -1.64
SSSCA1O60232 AC007786.3-201ENST00000615154 596 ntBASIC4.8□□□□□ -1.64
SSSCA1O60232 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC4.8□□□□□ -1.64
SSSCA1O60232 AL355480.4-201ENST00000626823 69 ntBASIC4.8□□□□□ -1.64
SSSCA1O60232 MBD5-221ENST00000637159 902 ntTSL 5 BASIC4.8□□□□□ -1.64
SSSCA1O60232 AC026523.2-201ENST00000625039 7739 ntBASIC4.8□□□□□ -1.64
SSSCA1O60232 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.8□□□□□ -1.64
SSSCA1O60232 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.8□□□□□ -1.64
SSSCA1O60232 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSSCA1O60232 AC004023.1-201ENST00000561473 1744 ntBASIC4.8□□□□□ -1.64
SSSCA1O60232 AL049869.1-201ENST00000556933 1402 ntBASIC4.8□□□□□ -1.64
SSSCA1O60232 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SSSCA1O60232 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.79□□□□□ -1.64
SSSCA1O60232 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
SSSCA1O60232 ABCC13-202ENST00000463099 3842 ntBASIC4.79□□□□□ -1.64
SSSCA1O60232 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSSCA1O60232 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
SSSCA1O60232 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSSCA1O60232 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSSCA1O60232 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.79□□□□□ -1.64
SSSCA1O60232 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.79□□□□□ -1.64
SSSCA1O60232 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSSCA1O60232 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSSCA1O60232 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC4.79□□□□□ -1.64
SSSCA1O60232 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSSCA1O60232 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSSCA1O60232 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSSCA1O60232 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSSCA1O60232 RN7SKP145-201ENST00000363291 303 ntBASIC4.79□□□□□ -1.64
SSSCA1O60232 RNA5SP211-201ENST00000365516 117 ntBASIC4.79□□□□□ -1.64
SSSCA1O60232 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSSCA1O60232 AC003045.1-201ENST00000398779 713 ntBASIC4.79□□□□□ -1.64
SSSCA1O60232 AL353133.1-201ENST00000407695 401 ntBASIC4.79□□□□□ -1.64
SSSCA1O60232 AL139100.1-201ENST00000408001 498 ntBASIC4.79□□□□□ -1.64
SSSCA1O60232 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC4.79□□□□□ -1.64
SSSCA1O60232 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSSCA1O60232 AC096632.2-201ENST00000438139 1239 ntBASIC4.79□□□□□ -1.64
SSSCA1O60232 AL663074.2-201ENST00000440621 479 ntBASIC4.79□□□□□ -1.64
SSSCA1O60232 CXCR2P1-202ENST00000443392 1074 ntBASIC4.79□□□□□ -1.64
SSSCA1O60232 POU5F1P5-201ENST00000445059 658 ntBASIC4.79□□□□□ -1.64
SSSCA1O60232 COX4I1P2-201ENST00000447446 547 ntBASIC4.79□□□□□ -1.64
SSSCA1O60232 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC4.79□□□□□ -1.64
SSSCA1O60232 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC4.79□□□□□ -1.64
SSSCA1O60232 AC104164.1-201ENST00000460282 590 ntBASIC4.79□□□□□ -1.64
SSSCA1O60232 AC090602.1-201ENST00000469695 252 ntBASIC4.79□□□□□ -1.64
SSSCA1O60232 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC4.79□□□□□ -1.64
SSSCA1O60232 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC4.79□□□□□ -1.64
SSSCA1O60232 KHDC1P1-201ENST00000511053 508 ntBASIC4.79□□□□□ -1.64
SSSCA1O60232 RNA5SP206-201ENST00000516703 121 ntBASIC4.79□□□□□ -1.64
SSSCA1O60232 IGHVII-49-1-201ENST00000521760 224 ntBASIC4.79□□□□□ -1.64
SSSCA1O60232 AL121594.2-201ENST00000541658 472 ntBASIC4.79□□□□□ -1.64
SSSCA1O60232 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC4.79□□□□□ -1.64
SSSCA1O60232 AC008055.1-201ENST00000547032 609 ntBASIC4.79□□□□□ -1.64
SSSCA1O60232 AC089984.3-201ENST00000552838 363 ntBASIC4.79□□□□□ -1.64
SSSCA1O60232 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC4.79□□□□□ -1.64
SSSCA1O60232 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.79□□□□□ -1.64
SSSCA1O60232 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.79□□□□□ -1.64
SSSCA1O60232 FCGR1CP-201ENST00000579737 1127 ntBASIC4.79□□□□□ -1.64
SSSCA1O60232 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSSCA1O60232 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC4.79□□□□□ -1.64
SSSCA1O60232 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC4.79□□□□□ -1.64
SSSCA1O60232 AC119674.1-217ENST00000641942 1086 ntBASIC4.79□□□□□ -1.64
SSSCA1O60232 AP001029.2-203ENST00000589795 4910 ntBASIC4.79□□□□□ -1.64
SSSCA1O60232 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
SSSCA1O60232 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSSCA1O60232 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.79□□□□□ -1.64
SSSCA1O60232 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.79□□□□□ -1.64
SSSCA1O60232 AP005435.3-201ENST00000531260 3198 ntBASIC4.79□□□□□ -1.64
SSSCA1O60232 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
SSSCA1O60232 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSSCA1O60232 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC4.79□□□□□ -1.64
SSSCA1O60232 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
SSSCA1O60232 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
SSSCA1O60232 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.78□□□□□ -1.64
SSSCA1O60232 AC009220.2-201ENST00000489759 1751 ntBASIC4.78□□□□□ -1.64
SSSCA1O60232 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
SSSCA1O60232 VN2R1P-201ENST00000449668 1743 ntBASIC4.78□□□□□ -1.64
SSSCA1O60232 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.78□□□□□ -1.64
SSSCA1O60232 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
SSSCA1O60232 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SSSCA1O60232 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SSSCA1O60232 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms