Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
RIPK2O43353 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
RIPK2O43353 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RIPK2O43353 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
RIPK2O43353 MIR301B-201ENST00000390813 78 ntBASIC6.11□□□□□ -1.43
RIPK2O43353 RN7SKP117-201ENST00000410175 264 ntBASIC6.11□□□□□ -1.43
RIPK2O43353 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC6.11□□□□□ -1.43
RIPK2O43353 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.11□□□□□ -1.43
RIPK2O43353 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.11□□□□□ -1.43
RIPK2O43353 SLC25A24P1-202ENST00000434803 1220 ntBASIC6.11□□□□□ -1.43
RIPK2O43353 RPSAP41-201ENST00000439695 860 ntBASIC6.11□□□□□ -1.43
RIPK2O43353 GAPDHP37-201ENST00000442317 968 ntBASIC6.11□□□□□ -1.43
RIPK2O43353 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.11□□□□□ -1.43
RIPK2O43353 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.11□□□□□ -1.43
RIPK2O43353 AC073072.2-201ENST00000447425 348 ntBASIC6.11□□□□□ -1.43
RIPK2O43353 AC079080.1-201ENST00000479841 822 ntBASIC6.11□□□□□ -1.43
RIPK2O43353 RN7SL350P-201ENST00000492591 299 ntBASIC6.11□□□□□ -1.43
RIPK2O43353 AC008868.1-201ENST00000509786 737 ntBASIC6.11□□□□□ -1.43
RIPK2O43353 RNA5SP206-201ENST00000516703 121 ntBASIC6.11□□□□□ -1.43
RIPK2O43353 VDAC3-206ENST00000521158 949 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
RIPK2O43353 AC130366.1-201ENST00000526505 1192 ntBASIC6.11□□□□□ -1.43
RIPK2O43353 AP002004.1-206ENST00000532441 876 ntBASIC6.11□□□□□ -1.43
RIPK2O43353 AC103855.4-201ENST00000533158 265 ntBASIC6.11□□□□□ -1.43
RIPK2O43353 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.11□□□□□ -1.43
RIPK2O43353 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.11□□□□□ -1.43
RIPK2O43353 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.11□□□□□ -1.43
RIPK2O43353 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.11□□□□□ -1.43
RIPK2O43353 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.11□□□□□ -1.43
RIPK2O43353 AC026898.1-201ENST00000586404 571 ntBASIC6.11□□□□□ -1.43
RIPK2O43353 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.11□□□□□ -1.43
RIPK2O43353 LSM1P2-201ENST00000604911 322 ntBASIC6.11□□□□□ -1.43
RIPK2O43353 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.11□□□□□ -1.43
RIPK2O43353 uc_338.26-201ENST00000612659 160 ntBASIC6.11□□□□□ -1.43
RIPK2O43353 MIR6726-201ENST00000613751 61 ntBASIC6.11□□□□□ -1.43
RIPK2O43353 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RIPK2O43353 AC096708.4-201ENST00000620563 552 ntBASIC6.11□□□□□ -1.43
RIPK2O43353 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RIPK2O43353 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC6.11□□□□□ -1.43
RIPK2O43353 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.11□□□□□ -1.43
RIPK2O43353 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.11□□□□□ -1.43
RIPK2O43353 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RIPK2O43353 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RIPK2O43353 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.11□□□□□ -1.43
RIPK2O43353 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
RIPK2O43353 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RIPK2O43353 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
RIPK2O43353 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RIPK2O43353 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
RIPK2O43353 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.11□□□□□ -1.43
RIPK2O43353 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
RIPK2O43353 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.1□□□□□ -1.43
RIPK2O43353 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
RIPK2O43353 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RIPK2O43353 AL591135.1-201ENST00000401578 5914 ntBASIC6.1□□□□□ -1.43
RIPK2O43353 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RIPK2O43353 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.1□□□□□ -1.43
RIPK2O43353 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.1□□□□□ -1.43
RIPK2O43353 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RIPK2O43353 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RIPK2O43353 CDC27P2-201ENST00000425026 1922 ntBASIC6.1□□□□□ -1.43
RIPK2O43353 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RIPK2O43353 Y_RNA.209-201ENST00000364156 111 ntBASIC6.1□□□□□ -1.43
RIPK2O43353 RNU105B-201ENST00000364478 208 ntBASIC6.1□□□□□ -1.43
RIPK2O43353 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RIPK2O43353 AL139100.1-201ENST00000408001 498 ntBASIC6.1□□□□□ -1.43
RIPK2O43353 AL158827.1-201ENST00000416300 391 ntBASIC6.1□□□□□ -1.43
RIPK2O43353 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.1□□□□□ -1.43
RIPK2O43353 AL354766.1-201ENST00000423396 542 ntBASIC6.1□□□□□ -1.43
RIPK2O43353 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC6.1□□□□□ -1.43
RIPK2O43353 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.1□□□□□ -1.43
RIPK2O43353 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.1□□□□□ -1.43
RIPK2O43353 HIGD1AP16-201ENST00000450986 258 ntBASIC6.1□□□□□ -1.43
RIPK2O43353 AC108751.3-201ENST00000461814 1020 ntBASIC6.1□□□□□ -1.43
RIPK2O43353 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.1□□□□□ -1.43
RIPK2O43353 AC091544.1-201ENST00000484702 348 ntBASIC6.1□□□□□ -1.43
RIPK2O43353 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.1□□□□□ -1.43
RIPK2O43353 CFI-204ENST00000510800 667 ntTSL 2 BASIC6.1□□□□□ -1.43
RIPK2O43353 ASNSP4-201ENST00000511103 447 ntBASIC6.1□□□□□ -1.43
RIPK2O43353 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.1□□□□□ -1.43
RIPK2O43353 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.1□□□□□ -1.43
RIPK2O43353 AC090424.1-201ENST00000535243 736 ntBASIC6.1□□□□□ -1.43
RIPK2O43353 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.1□□□□□ -1.43
RIPK2O43353 BMS1P16-201ENST00000556075 1147 ntBASIC6.1□□□□□ -1.43
RIPK2O43353 AC009962.1-201ENST00000567327 3813 ntBASIC6.1□□□□□ -1.43
RIPK2O43353 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.1□□□□□ -1.43
RIPK2O43353 MIR378H-201ENST00000579966 83 ntBASIC6.1□□□□□ -1.43
RIPK2O43353 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.1□□□□□ -1.43
RIPK2O43353 AL008582.1-201ENST00000609612 442 ntBASIC6.1□□□□□ -1.43
RIPK2O43353 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RIPK2O43353 MIR6849-201ENST00000618543 69 ntBASIC6.1□□□□□ -1.43
RIPK2O43353 AC018558.4-201ENST00000622153 281 ntBASIC6.1□□□□□ -1.43
RIPK2O43353 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.1□□□□□ -1.43
RIPK2O43353 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.1□□□□□ -1.43
RIPK2O43353 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
RIPK2O43353 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RIPK2O43353 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RIPK2O43353 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.1□□□□□ -1.43
RIPK2O43353 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
RIPK2O43353 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
RIPK2O43353 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms