Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 RNA5SP418-201ENST00000515951 117 ntBASIC5.91□□□□□ -1.46
RNF103-CHMP3A0A140T963 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.91□□□□□ -1.46
RNF103-CHMP3A0A140T963 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.91□□□□□ -1.46
RNF103-CHMP3A0A140T963 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.91□□□□□ -1.46
RNF103-CHMP3A0A140T963 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC5.91□□□□□ -1.46
RNF103-CHMP3A0A140T963 LINC00556-201ENST00000569603 412 ntBASIC5.91□□□□□ -1.46
RNF103-CHMP3A0A140T963 RN7SL475P-201ENST00000583379 298 ntBASIC5.91□□□□□ -1.46
RNF103-CHMP3A0A140T963 AC027229.1-201ENST00000583887 253 ntBASIC5.91□□□□□ -1.46
RNF103-CHMP3A0A140T963 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.91□□□□□ -1.46
RNF103-CHMP3A0A140T963 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.91□□□□□ -1.46
RNF103-CHMP3A0A140T963 AL589863.1-201ENST00000595383 631 ntBASIC5.91□□□□□ -1.46
RNF103-CHMP3A0A140T963 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.91□□□□□ -1.46
RNF103-CHMP3A0A140T963 AC027334.1-201ENST00000603257 310 ntBASIC5.91□□□□□ -1.46
RNF103-CHMP3A0A140T963 AL589743.6-201ENST00000611025 117 ntBASIC5.91□□□□□ -1.46
RNF103-CHMP3A0A140T963 MIR6070-201ENST00000613967 103 ntBASIC5.91□□□□□ -1.46
RNF103-CHMP3A0A140T963 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
RNF103-CHMP3A0A140T963 MIR6503-201ENST00000622884 86 ntBASIC5.91□□□□□ -1.46
RNF103-CHMP3A0A140T963 AC087821.1-201ENST00000623639 567 ntBASIC5.91□□□□□ -1.46
RNF103-CHMP3A0A140T963 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
RNF103-CHMP3A0A140T963 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.91□□□□□ -1.46
RNF103-CHMP3A0A140T963 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RNF103-CHMP3A0A140T963 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RNF103-CHMP3A0A140T963 AC005261.6-201ENST00000623072 1387 ntBASIC5.91□□□□□ -1.46
RNF103-CHMP3A0A140T963 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RNF103-CHMP3A0A140T963 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
RNF103-CHMP3A0A140T963 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RNF103-CHMP3A0A140T963 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 BCORP1-203ENST00000513194 5093 ntBASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 AP001541.1-201ENST00000623322 1904 ntBASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 AL121977.1-201ENST00000401636 979 ntBASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 VN1R31P-201ENST00000417498 730 ntBASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 RPL12P43-201ENST00000420608 499 ntBASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 SNRPFP2-201ENST00000440710 251 ntBASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 GTF2IP14-201ENST00000441415 586 ntBASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 RANP2-201ENST00000456833 229 ntBASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 ADAM3B-201ENST00000569937 840 ntBASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 AC125494.2-201ENST00000602431 657 ntBASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 AC068213.1-201ENST00000625124 226 ntBASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 AC003992.1-201ENST00000635364 557 ntBASIC5.9□□□□□ -1.46
RNF103-CHMP3A0A140T963 MTND5P23-201ENST00000430812 1655 ntBASIC5.9□□□□□ -1.47
RNF103-CHMP3A0A140T963 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.9□□□□□ -1.47
RNF103-CHMP3A0A140T963 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
RNF103-CHMP3A0A140T963 AC112255.1-201ENST00000624070 2493 ntBASIC5.9□□□□□ -1.47
RNF103-CHMP3A0A140T963 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RNF103-CHMP3A0A140T963 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.47
RNF103-CHMP3A0A140T963 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.9□□□□□ -1.47
RNF103-CHMP3A0A140T963 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RNF103-CHMP3A0A140T963 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RNF103-CHMP3A0A140T963 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.9□□□□□ -1.47
RNF103-CHMP3A0A140T963 AL592429.1-201ENST00000403909 1473 ntBASIC5.9□□□□□ -1.47
RNF103-CHMP3A0A140T963 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.9□□□□□ -1.47
RNF103-CHMP3A0A140T963 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.9□□□□□ -1.47
RNF103-CHMP3A0A140T963 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RNF103-CHMP3A0A140T963 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RNF103-CHMP3A0A140T963 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RNF103-CHMP3A0A140T963 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.89□□□□□ -1.47
RNF103-CHMP3A0A140T963 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RNF103-CHMP3A0A140T963 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
RNF103-CHMP3A0A140T963 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RNF103-CHMP3A0A140T963 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RNF103-CHMP3A0A140T963 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RNF103-CHMP3A0A140T963 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RNF103-CHMP3A0A140T963 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RNF103-CHMP3A0A140T963 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RNF103-CHMP3A0A140T963 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
RNF103-CHMP3A0A140T963 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.89□□□□□ -1.47
RNF103-CHMP3A0A140T963 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.89□□□□□ -1.47
RNF103-CHMP3A0A140T963 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.89□□□□□ -1.47
RNF103-CHMP3A0A140T963 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.89□□□□□ -1.47
RNF103-CHMP3A0A140T963 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms