Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC011891.2-201ENST00000604949 397 ntBASIC4.65□□□□□ -1.67
HLA-DRB4X5D2U9 IGKV2OR2-1-201ENST00000605129 304 ntBASIC4.65□□□□□ -1.67
HLA-DRB4X5D2U9 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DRB4X5D2U9 AL021368.3-201ENST00000607119 578 ntBASIC4.65□□□□□ -1.67
HLA-DRB4X5D2U9 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC4.65□□□□□ -1.67
HLA-DRB4X5D2U9 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DRB4X5D2U9 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC4.65□□□□□ -1.67
HLA-DRB4X5D2U9 LINC01613-201ENST00000561476 2780 ntBASIC4.65□□□□□ -1.67
HLA-DRB4X5D2U9 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
HLA-DRB4X5D2U9 AP000473.2-201ENST00000602659 1537 ntBASIC4.65□□□□□ -1.67
HLA-DRB4X5D2U9 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC4.65□□□□□ -1.67
HLA-DRB4X5D2U9 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DRB4X5D2U9 CCNT2P1-201ENST00000423082 1315 ntBASIC4.65□□□□□ -1.67
HLA-DRB4X5D2U9 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC4.65□□□□□ -1.67
HLA-DRB4X5D2U9 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DRB4X5D2U9 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DRB4X5D2U9 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
HLA-DRB4X5D2U9 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HLA-DRB4X5D2U9 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 RPL11P4-201ENST00000332269 436 ntBASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 RNA5SP77-201ENST00000365394 120 ntBASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 PSMA6P1-201ENST00000400275 741 ntBASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 AL096800.1-201ENST00000405326 893 ntBASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 RN7SKP121-201ENST00000410842 305 ntBASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 BX276092.6-201ENST00000430476 250 ntBASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 AC073476.1-201ENST00000452854 407 ntBASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 BX276092.8-201ENST00000455722 250 ntBASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 RN7SL612P-201ENST00000497704 295 ntBASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 RAB30-209ENST00000532548 644 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 AC002069.2-201ENST00000603580 883 ntBASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 RPL12P48-201ENST00000605620 304 ntBASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 AL022394.1-201ENST00000606979 292 ntBASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 AC010998.3-201ENST00000613871 631 ntBASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 AL122023.1-201ENST00000622847 530 ntBASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 AC116667.2-201ENST00000641075 823 ntBASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 AC114876.1-201ENST00000490962 1366 ntBASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 PPBPP2-201ENST00000513150 1362 ntBASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HLA-DRB4X5D2U9 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 AL078595.2-201ENST00000605309 1780 ntBASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 RNA5SP453-201ENST00000362503 119 ntBASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 RNA5SP346-201ENST00000363541 121 ntBASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 MIR191-201ENST00000384873 92 ntBASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
HLA-DRB4X5D2U9 NPM1P38-201ENST00000403835 865 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms