Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 CCAT2-201ENST00000630920 1752 ntBASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 STAG3L4-201ENST00000352103 530 ntBASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 RNA5SP333-201ENST00000363466 118 ntBASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 RNA5SP334-201ENST00000364825 118 ntBASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 RNA5SP279-201ENST00000365513 117 ntBASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 AC092642.1-201ENST00000392417 425 ntBASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 MTATP6P17-201ENST00000431030 672 ntBASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 Z80107.1-201ENST00000436830 412 ntBASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 AC093166.3-201ENST00000448785 303 ntBASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 NPM1P29-201ENST00000483112 803 ntBASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 MTCO1P31-201ENST00000506355 492 ntBASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 AC007068.2-201ENST00000543168 395 ntBASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 AC125612.1-201ENST00000547580 377 ntBASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 AP003115.1-201ENST00000569849 463 ntBASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 CLIC4P2-201ENST00000601934 717 ntBASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 AC073333.2-201ENST00000603589 769 ntBASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 AC012175.1-201ENST00000603755 531 ntBASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 AC008759.3-201ENST00000613300 508 ntBASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 SNX18P10-201ENST00000625014 519 ntBASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 CASC19-274ENST00000642018 970 ntBASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 AP002370.1-201ENST00000528055 1602 ntBASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC6.6□□□□□ -1.35
PCDHB1Q9Y5F3 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 NEK2P2-201ENST00000438441 1338 ntBASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 RNA5SP321-201ENST00000362722 111 ntBASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 SNORA38B-201ENST00000363524 131 ntBASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 RN7SKP199-201ENST00000410325 305 ntBASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 RANP4-201ENST00000413361 655 ntBASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 Z68868.1-201ENST00000429048 544 ntBASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 AC114973.1-201ENST00000429057 632 ntBASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 AC005017.1-201ENST00000482002 490 ntBASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 NAMPTP2-201ENST00000505629 1115 ntBASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 OR52H2P-201ENST00000514607 902 ntBASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.59□□□□□ -1.35
PCDHB1Q9Y5F3 OR56A7P-201ENST00000524865 941 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms