Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 MTCO1P22-201ENST00000604619 1360 ntBASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 TATDN2P3-201ENST00000452855 3665 ntBASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
SSX2IPQ9Y2D8 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 RNU6-891P-201ENST00000384280 111 ntBASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 MT-RNR1-201ENST00000389680 954 ntBASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 AL390879.2-203ENST00000426943 1121 ntBASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 HSFY7P-201ENST00000432672 318 ntBASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 HSFY8P-201ENST00000437934 318 ntBASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 AMYP1-201ENST00000440059 1023 ntBASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 GTF2IP14-201ENST00000441415 586 ntBASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 HSFY5P-201ENST00000453726 309 ntBASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 RARRES2P3-201ENST00000457739 473 ntBASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 RN7SL643P-201ENST00000471845 291 ntBASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 HMGN1P17-201ENST00000513734 295 ntBASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 AC009879.1-201ENST00000520029 839 ntBASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 AC023245.2-201ENST00000530760 2978 ntBASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 AL136520.1-202ENST00000555494 763 ntBASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 AL138895.2-201ENST00000603019 178 ntBASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 AC253576.2-201ENST00000618815 580 ntBASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 AC005618.1-201ENST00000606901 3148 ntBASIC6.9□□□□□ -1.3
SSX2IPQ9Y2D8 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.9□□□□□ -1.31
SSX2IPQ9Y2D8 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
SSX2IPQ9Y2D8 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
SSX2IPQ9Y2D8 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.9□□□□□ -1.31
SSX2IPQ9Y2D8 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
SSX2IPQ9Y2D8 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
SSX2IPQ9Y2D8 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.9□□□□□ -1.31
SSX2IPQ9Y2D8 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
SSX2IPQ9Y2D8 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 RN7SKP275-201ENST00000364626 301 ntBASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 RNA5SP122-201ENST00000384457 108 ntBASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 RPL23AP85-201ENST00000421838 433 ntBASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 MED28P4-201ENST00000433137 572 ntBASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 AC110602.1-201ENST00000437414 318 ntBASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 MTCO3P43-201ENST00000440974 771 ntBASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 RPL6P30-201ENST00000443382 862 ntBASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 CAB39P1-201ENST00000502277 460 ntBASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 AC067852.5-201ENST00000589299 310 ntBASIC6.89□□□□□ -1.31
SSX2IPQ9Y2D8 AL583832.1-201ENST00000603227 784 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms